Gene Ccel_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1025 
Symbol 
ID7312175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1277219 
End bp1278553 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content38% 
IMG OID643607952 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002505367 
Protein GI220928458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000399953 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATGC ACAAGATTTT AGTATCTACC ATACTATCTG TAGCGATGTT GTTATCTATA 
ACTGCATGTG GATCTAATGA TGCGGGATCT GGTGATAAGG CACAGAGTAC GGGTACTACA
TCTGCTGATA CAAATAAAGA AAATAAAGGT ACTACTAAAT TAACAATGTG GCATATCCAG
ACACAAGAAA ATGTTGCTGA TATTATTGAT GCTTCAATGG ATAGATTTGC AAAAGACAAT
CCAGGTTTTG AAATGGAAGC TGTCCCAATG CAAAATGACC CATATAAGAC CAAACTTATC
ACTGCAATGA GTGCAAATGA ACTCCCTGAC GTCTTTATTC ACTGGACAGG AGGTCCGATG
ATCTCCTACA TTGATTCAGG TGCAGTATAT GATATAACTG AATATATGAA TAAAGATAAT
TACAAGGATA AATTCCTGGA TGCTTCTATA CAGCAAGCTA CTTATAAAGA TTCCATTTGG
GCTGTTCCTG TAGAAAATGT ATCTCCTGCC CTGATGTTCT ACAACAAAAA GCTGTTTGCT
GATAATGGCA TTGAAGTTCC AAAAACTCTT GACGAATTTG AAAAAGTAAG TGACACTTTT
GTACAAAAGG GTATCATACC TGTTTCACTT GCTAACAAGA CAAAATGGCC TGGATCAATT
GTATATGGAT ATGTTCTGGA TAGAATAGCT GGTCCAAATG CATTTGCAGA TGCAAATAAC
GGCGTAACTC AATTTGATAC ACCAGACTTT TTGGCTGCCG CTACAAAAAT ACAAACTTGG
GCTAAAAAAG GTTATTTCGG GAAAGACTTC AACGGAATGG ACTATGATGC CGGTCAAGAC
AGACAATTGT TCTACAATGG TAAAGCAGCC ATGTACATAA TGGGAGGCTG GTTCCTGTTT
ACTGCAAAGG GAGAAAATCC AGAATTTGTT GAAAATGTAG GAGTAATGCA GTTCCCAGCA
AACCCTGACA GCAAGGGTAA GGCATCCGAA TATATCGGTA CAATGGGTGA CAACTTCTAT
TCTGTATCCA AGAATTCCAA GAACCCAGAG ATGGCATTCA AAGCTATTAC ATATATGCTT
GATGATCAGG CTGTTAAGGA AAGGATTGAA TCAGGAAAAA TTCCTCCTCT TAAAGGCATA
ACATTGACTG ATGAAATCAG TAAAATTGTT TCTGATAGTG CATCTTCAGC TACAAGCATG
CAGCTCTGGC TTGATCAGTA TCTTGCACCG AACGATGCAG AATTACATAA AGATCAATTA
CAAAAATTAT TGGCTGGTTC GATCACACCT GAACAATATA ATAAAAGTAT GACGGATGGC
GTAAAGAACA AATAA
 
Protein sequence
MKMHKILVST ILSVAMLLSI TACGSNDAGS GDKAQSTGTT SADTNKENKG TTKLTMWHIQ 
TQENVADIID ASMDRFAKDN PGFEMEAVPM QNDPYKTKLI TAMSANELPD VFIHWTGGPM
ISYIDSGAVY DITEYMNKDN YKDKFLDASI QQATYKDSIW AVPVENVSPA LMFYNKKLFA
DNGIEVPKTL DEFEKVSDTF VQKGIIPVSL ANKTKWPGSI VYGYVLDRIA GPNAFADANN
GVTQFDTPDF LAAATKIQTW AKKGYFGKDF NGMDYDAGQD RQLFYNGKAA MYIMGGWFLF
TAKGENPEFV ENVGVMQFPA NPDSKGKASE YIGTMGDNFY SVSKNSKNPE MAFKAITYML
DDQAVKERIE SGKIPPLKGI TLTDEISKIV SDSASSATSM QLWLDQYLAP NDAELHKDQL
QKLLAGSITP EQYNKSMTDG VKNK