Gene Ccel_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0897 
Symbol 
ID7309738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1074607 
End bp1075968 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content40% 
IMG OID643607834 
ProductMATE efflux family protein 
Protein accessionYP_002505249 
Protein GI220928340 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.62958e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGTT TAAAACTTAA GAACAAGGAA TTTTATTTGA AGCTTTTTTC GCTGGCCTTA 
CCGATAACTA TTCAGAACTT AATTTCTTCA TCTCTTGGCG TGGTTGACTC TGTAATGGTC
GGTTCTCTGG GGAATCAGTC ATTAGCAGCC GTGGGTGTTG CCAACCAATA CGGTCTGATA
GTATTTTTGC TATACAATGC AATCCACAGT GGGTGTGGTA TTTATGTGGC CCAATTCTGG
GGTAAAAATG ACCACGATAA TATAGGAAGA GTGGTAAATC TGGATATTGC AATAGCAGCA
AGTGTATCAT TGATACTTTC AGCTATAGGC ATATTGCTGC CAGAACAAAT TATATCGGTT
TTTAATACCG ACCCGGTGGT TATTAGTCAG GGTGCAGATT TTTTAAGAAT ATTAAGTATG
AGTTTTGTAT TTGCATCAAT AAGTTTTGGA TTCAGCGTAG CTCTAAGGAG TATAGGGAAG
TCTACTATGC CGATGATAAT AAGTGCTTCA GCACTGGCCC TCAACACGAT TCTCAATTAT
ATTCTGATAT ATGGAAGGTT TGGTATGCCA CAAATGGGGG TAAGGGGCTC CGCAACAAGT
ACTTTAATAG CCAGAATAGT TGAAATGATT TTATTTCTTA TTGCCGTATC AAAATACTTT
CCATTGCTGA AAATCAGAGT AAGCGAGCTT ATGAAGGTTA CGAAAGATTT GTTGGGAAGG
GTTACCAAGA CCATGATACC TGTTATCCTT AATGAAATGT GTTGGGGACT GGGTACTGTG
GTATATTCAA TTGCGTATGG CAGGATAAGT ACTGAGGCGT TTGATGCAGT TCAGATAACA
AACAACGTAG TTAACCTGTT TACGGTAGCT GCTTTTGGTA TGGCCAGTGC AGCTGCGGTT
ATGACAGGAC ATGTTATAGG TGCTGGGGAG GAAAAAAAAG GAAGGCAGTA TGCGTGGGGG
TTTGTGCGAC TGTGTATAAT AGGAGGATTT ATTCTGGGTG GACTTCTATA CCTATTCTCT
CCGTCGATTG TAAGCTTGTT CAAGGTAAGC AGTGATGTCC TTGAAACATC TATAATATTG
TTGGCAATTA ACGCCATTAT TCTACCTATA AGGTTTACAA ACATAGTTGC CATTGTGGGA
GTTCTGCGTG GAGGGGGAGA CGCTTCATTT GCTTTTATTG CTGAAGGCAT GACTATGTGG
CTTATAGGGG TGCCGCTTTC CTTTATAGGT GCATTTGTTC TCAGACTTGA TGTTCAGTGG
GTTGTCCTCA TGGTAATGGC GGAAGAGATT GTTAAAATGA TTTGCGGTGT TGCCAGATTA
AGGTCAAATA AGTGGATAAA AAATGTTGTC AGAGAAATTT GA
 
Protein sequence
MQSLKLKNKE FYLKLFSLAL PITIQNLISS SLGVVDSVMV GSLGNQSLAA VGVANQYGLI 
VFLLYNAIHS GCGIYVAQFW GKNDHDNIGR VVNLDIAIAA SVSLILSAIG ILLPEQIISV
FNTDPVVISQ GADFLRILSM SFVFASISFG FSVALRSIGK STMPMIISAS ALALNTILNY
ILIYGRFGMP QMGVRGSATS TLIARIVEMI LFLIAVSKYF PLLKIRVSEL MKVTKDLLGR
VTKTMIPVIL NEMCWGLGTV VYSIAYGRIS TEAFDAVQIT NNVVNLFTVA AFGMASAAAV
MTGHVIGAGE EKKGRQYAWG FVRLCIIGGF ILGGLLYLFS PSIVSLFKVS SDVLETSIIL
LAINAIILPI RFTNIVAIVG VLRGGGDASF AFIAEGMTMW LIGVPLSFIG AFVLRLDVQW
VVLMVMAEEI VKMICGVARL RSNKWIKNVV REI