Gene Ccel_0855 details

Gene Information

• Locus tag: Ccel_0855
• ID: 7309700
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 973821
• End bp: 974507
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643607792
• Product: ABC transporter related
• Protein accession: YP_002505207
• Protein GI: 220928298
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00113999
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATTG TAAATGTAAA GCAATTAAAG AAAGATTACG ATCTTGGAAG GACAAAGGTT 
CCTGCTTTAA GAGGTGTTGA TTTGATAATC GAAAAAGGAG AATTTGTGAC CATAGCAGGT 
CCTTCAGGTT GCGGAAAGAC TACAACTCTT AATATAATGG GATGTCTTGA CAAAGCGACA 
AGTGGGGAAG TATGGATAAA CGACTGCCTT ATAAACAACT TGGAGGAGAA AAAACTCAAC 
AGTCTCCGTC TTAACACAAT CGGATTTATA TTCCAAGCTT TTAACCTTGT TCCCGTATTG 
AATGTTTATG AGAATGTTGA GCTTCCTCTC CTGATTATAA AGAATGTTTC TTCAAATGAG 
AGAAGGGAAA GGGTAAATTA TTTCTTAAAA GCAGTAGGAC TTTTTGAACA TGCCAAAAAG 
AAACCTTCAG AGCTTTCCGG AGGACAAAGA CAGCGTGTGG CTGTTGCAAG AGCACTGGTT 
ACAAAGCCTA AAATAGTACT TGCCGATGAG CCAACTGCTA ACCTTGATTC CAAGAACGGT 
ATGGAAATAA TCGAGCTCAT GCATGATATA AGCAGGAAAG AATCAACTAC GTTTATATTC 
TCAACTCACG ATCCCAAGGT TATGCAAAAA GCTGACCGTA TAATTCATAT GGAAGACGGG 
TTGATAAAAA GTGAGGTTAG CATATGA 

 

Protein sequence

MAIVNVKQLK KDYDLGRTKV PALRGVDLII EKGEFVTIAG PSGCGKTTTL NIMGCLDKAT 
SGEVWINDCL INNLEEKKLN SLRLNTIGFI FQAFNLVPVL NVYENVELPL LIIKNVSSNE 
RRERVNYFLK AVGLFEHAKK KPSELSGGQR QRVAVARALV TKPKIVLADE PTANLDSKNG 
MEIIELMHDI SRKESTTFIF STHDPKVMQK ADRIIHMEDG LIKSEVSI