Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0819 |
Symbol | smpB |
ID | 7309666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 939487 |
End bp | 939951 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643607761 |
Product | SsrA-binding protein |
Protein accession | YP_002505177 |
Protein GI | 220928268 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0691] tmRNA-binding protein |
TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.796399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAGG AAGCAGTTAA GATTGTTGCT CAAAATAAAA AAGCTCGACA TGATTATTTT ATCGAAGAAA CCATAGAAGC AGGCATTGTG CTTTCAGGTA CAGAGGTAAA GTCTGTCCGA CAGGGCAAGC TCAATTTAAA GGAAAGCTAT GCTTCTATTG TTGAGGGGGA AGTTATTGTA AGCGGAATGC ATATAAGCCC TTACGAACAA GGTAATATTT TTAACAAGGA CCCCTTGCGT GACAGAAAGC TGCTTTTGCA CAAGTCTGAA ATAAACAGGC TTATAGGGTT GACCCAACAA AAGGGTTACA CGCTAGTTCC CGTTCAGGCA TACTTAAAAC GTGGTATGGT TAAAATAGAA CTAGGCGTTG CACGCGGTAA AAAACTGTAT GACAAAAGAG ACGATATTGC AGCCCGTGAT GCTAAGAGAG AAATTGACAG AAAGATGAAA GAGCAGCTCA GGTAA
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Protein sequence | MVKEAVKIVA QNKKARHDYF IEETIEAGIV LSGTEVKSVR QGKLNLKESY ASIVEGEVIV SGMHISPYEQ GNIFNKDPLR DRKLLLHKSE INRLIGLTQQ KGYTLVPVQA YLKRGMVKIE LGVARGKKLY DKRDDIAARD AKREIDRKMK EQLR
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