Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0815 |
Symbol | |
ID | 7309663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 936615 |
End bp | 937322 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643607757 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002505173 |
Protein GI | 220928264 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.328303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATATTG ATATAGATGC AATTTTTAAG CAAAAACTTG CAGAGATAGA AAATAGACTG GCTGGTATTC CCGGAATGAA TATCGGGAGC TCTGTAAACT CAGAAATACC CTTTCAAAAG TATCTGGATG ATGCGACTCA GTCAGGTTTG ATTAACCCCC TAAGCGGACT TGAGGACAAT CCTTTGAAGG ATACGTCACT GACAGACTTA CTTGGTCAGC TTGATAACAG TAATACCGGA AACATTTTAA AAGCTCGCAC GGCTCTGGCA AATTCAAAAG CCTATATACC CACTGATATA AGCGAACTAA TGAATCTTAT AAATTCATGT ATAGACAGTG CCTCTGCCAA ATACGGAGTA GACAAAGAAT TAATAAGAGC CGTTATTAAA CAGGAATCCT CCTTTGATAC TACTGCTATT TCCAAAGCAG GAGCACAAGG GTTAATGCAG CTTATGCCCG GTACTGCTGA AGGCCTTGGA GTAAAGGACC CCTTTGATAT TCTTCAAAAT ATAGACGGTG GAACCCGGTA TTTAAAATAC CAGTTGGAAA GATTCGACGG AGACATAAGT CTTGCCTTGG CAGCGTATAA CGCAGGTCCC AACAGTGTAG ACAAATACGG TGGAATCCCT CCGTACACAG AAACCCAGAA TTATGTAAAA AATGTCACAG ATTATTATAA TCAATATAAA ATGTCAGCAA GCAGGTAA
|
Protein sequence | MNIDIDAIFK QKLAEIENRL AGIPGMNIGS SVNSEIPFQK YLDDATQSGL INPLSGLEDN PLKDTSLTDL LGQLDNSNTG NILKARTALA NSKAYIPTDI SELMNLINSC IDSASAKYGV DKELIRAVIK QESSFDTTAI SKAGAQGLMQ LMPGTAEGLG VKDPFDILQN IDGGTRYLKY QLERFDGDIS LALAAYNAGP NSVDKYGGIP PYTETQNYVK NVTDYYNQYK MSASR
|
| |