| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0593 |
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| Symbol | |
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| ID | 7309464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 684929 |
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| End bp | 685828 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607533 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002504954 |
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| Protein GI | 220928045 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000735687 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAG AGCGGATAAT CAGTGAGAAT GAAGCCAGAA AGACTCTTAA GCATGTGTTG
AAGAACGGGC TTAAGCTTTC TGAAAGACTT ATAAGAAAAC TAAAATTACA ACAGAAGATT
TATGTAAACG AACATCCCGA GAGAGTAAAC TATATTGTAA AGGCTGATGA CAGATTGAAG
GTAATACTTG ACTTGGAGGA GGAATGTGAG CATATAGAAC CTCAGGATAT ACCTCTTGAC
GTTATATACG AAGATGAATG TATGCTGGTT CTCAACAAGC AGTCGGGTAT AGTGGTACAT
CCTACAAGTT ACCATCCCGA TAATACCATA GCCAATGGTA TTGTTTATTA TCTGAAACAG
AAGGGTGTTA CCAAAAAGGT GCGGCCTGTC AGCCGTCTTG ACAGAGAAAC TTCAGGTATT
ATTATTTTTG CAAAGAACCA GTTCACTCAG GAAATGCTCA TCCAGCAAAT GCATAACAAT
CTGTTTAAAA AAGAGTATTT AGGTATTGTA CAGGGTATAC CCCAAAATAA CGAAGGCACT
ATTAATCTAC CTATAGCTAG AAAGCCGGGC AGCATTATGC TTAGGCATAT TTCAGAGGAA
GGAGCACCCT CAATAACACA TTACAAGATT CTTAAAACTT TCCCTTCACA TAATTCAGCC
TTGTTGAGCT TTAAGCTTGA AACTGGCCGT ACACACCAGA TAAGAGTTCA TTGTAAGGCA
ATGGGCTTTC CTATCTATGG TGACACTCTG TATTCAGATA ATACAAATTT ATTCATTTCC
CGGCAGGCCC TCCATTCTTA CAGAACAGAG ATAATTCACC CTGTAACCCT AAAAGGAGTT
ATATTCAAGG CTGAGCTTCC TTCCGACATA TCAGGACTTT TGGAAATACT AAGTAAATGA
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| Protein sequence | MILERIISEN EARKTLKHVL KNGLKLSERL IRKLKLQQKI YVNEHPERVN YIVKADDRLK
VILDLEEECE HIEPQDIPLD VIYEDECMLV LNKQSGIVVH PTSYHPDNTI ANGIVYYLKQ
KGVTKKVRPV SRLDRETSGI IIFAKNQFTQ EMLIQQMHNN LFKKEYLGIV QGIPQNNEGT
INLPIARKPG SIMLRHISEE GAPSITHYKI LKTFPSHNSA LLSFKLETGR THQIRVHCKA
MGFPIYGDTL YSDNTNLFIS RQALHSYRTE IIHPVTLKGV IFKAELPSDI SGLLEILSK
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