Gene Ccel_0557 details

Gene Information

• Locus tag: Ccel_0557
• ID: 7309427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 641686
• End bp: 642363
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643607493
• Product: ABC transporter related
• Protein accession: YP_002504919
• Protein GI: 220928010
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATAT TAAAAACAGA TGGATTAAGA AAATACTATG GCAAGGGTGA AAACCTTGTA 
AAAGCTCTTG ACGGCATAAA TCTGGAAATT CTGGAAGGAG AGTTTGTAGC GGTTGTAGGT 
ACATCAGGAA GCGGTAAATC GACGCTTTTG CATATGCTCG GGGGACTTGA TAAGGCTACA 
GAAGGTAAAG TAACGGTGGC GGGTAAGGAA TTTTTTGATA TGAATGATGA GCAAAAAACA 
GTCTTTCGCA GAAGAAATAT TGGTTTTATA TTTCAGAATT ACAATCTGGT ACCTATACTG 
AACGTTTATG AAAACATTAC TCTCCCTGTT GAACTGGATG GAGGAACTAT TGATAAAGCA 
TTTATAGACG ATATTATTAA AACCCTTGGC CTTGGCGGTA AGCTTACAAA CCTTCCAAAC 
AATCTTTCGG GAGGCCAACA GCAAAGGGTA GCTATAGCTA GGGCTCTGGC AACAAAACCC 
GCTATAATCC TTGCAGATGA GCCAACGGGT AATCTCGACA GCAAAACCGG GCTGGAGGTA 
GTAGGCTTGC TAAAAATGAC CAGCAAAAGA TTCCATCAAA CAATTGTTAT GATTACACAT 
AATGAAGAGA TTGCTCAGTT GGCGGACAGG GTTATCCGTA TTGAAGACGG TAAAATAGTC 
GGGGGTGAAG ACAAATGA 

 

Protein sequence

MSILKTDGLR KYYGKGENLV KALDGINLEI LEGEFVAVVG TSGSGKSTLL HMLGGLDKAT 
EGKVTVAGKE FFDMNDEQKT VFRRRNIGFI FQNYNLVPIL NVYENITLPV ELDGGTIDKA 
FIDDIIKTLG LGGKLTNLPN NLSGGQQQRV AIARALATKP AIILADEPTG NLDSKTGLEV 
VGLLKMTSKR FHQTIVMITH NEEIAQLADR VIRIEDGKIV GGEDK