Gene Ccel_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0540 
SymboldnaG 
ID7309412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp625885 
End bp627699 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content34% 
IMG OID643607474 
ProductDNA primase 
Protein accessionYP_002504902 
Protein GI220927993 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00398394 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATT TATTTCCAGA CGATCTTATT GAAGAAATAA GAGTAAGTAA TGACATTGTC 
GGTATTATAT CAGAATATGT CAAACTGGAG AAGAAAGGAA AGAACTTTTT TGGTAAATGT
CCTTTTCATA ACGAAAAGAC AGCATCGTTT TCTGTAGAAC CTGTAAAACA GATTTTTCAT
TGTTTTGGAT GCGGCAAAGG TGGGAACGTT ATACACTTTA TTATGTCTAT TGAAAATCTG
GAGTTTCCAG ATGCCTTAAG GTTTCTGGCA GATAGGGCAA AAATTCTGAT TCCGGATATG
ATTGAAGGTA ATCGTAATGA CGAAAAAGCC GGTTTGAAAA GGGAATTGTT GCAGATAAAC
CTTGAAGCAG CAAGGTTTTT TAGAGATAAC CTTAATAATG ACAAAAATAA GCTTCCAAAT
TCATATTTAA TAAACAGGAA AATACAGAAA AATACAGTTG CAAAGTTTGG TTTAGGCTAT
GCTGAGGACA GATTCGATAC ACTTTATAAA CACTTGAAGG CCAAAGGCTT TAGTGATACA
TCCATTAAAA ATAGTGGGCT TGTTATATAT AAGGAAGAAA GTGGTAACAT TTACGATAGA
TTTAGAGGCA GGATTATGTT TCCTATATTT GATATCAGAG GAAATGTAAT TGCATTTGGA
GGGAGAGTTC TTGATTCGTC TCAGCCAAAA TACATGAATT CTCCTGAAAC GGAAGTTTAC
CACAAAGGTA AACACTTGTA TGCCTTGAAT TTTGCAAAGA ATACTTGTTC CAGGCGGCTA
ATTTTAGCCG AGGGATATAT GGATGTTATA TCATTACATC AAAGTGGAAT ACTAAACTCA
GTTGCTCCGT TAGGAACAGC ATTAACCGAA AATCAGGGTA GACTTTTAAA GAAGTACACT
GAAGAAATAG TTCTTTCCTT TGATTCAGAT TCAGCTGGCC GGGCTGCTGC ATTCAGAAGC
CTTGATTTAT TGAACGAAAT TGGATGTAAT GTAAAGGTTT TAACAATCCC ATCAGGCAAG
GACCCCGATG AGTTTATTAA AGCATATGGC GTTGCAGAGT TTAAAAGGCT TGTTGATCGA
TCCGAAAGTT TGCTTGATTT TAAGCTTGGT TCACTAAAAA ATGATATAGA TACTTCGACA
AATGAAGGAA AAGTTAGGTT TCTTGATAAA GCTGTACTTA TATTGGATAA AATTGACAAT
AATGTAGAAA AAGAACTTTA TGTAAAAAAA TTATCTGAGG AGCTGGGTGT AAGTACACAG
TCCATCTTTT CAGAAATGGC AAAACAACAA AGAAATTCAG TTATAAAAGT TAGACAAGCA
GCAAGTAATA AAAACTTTAG CCGAAATCAA ATAAGAAAGA GTACAGTTGT TAAGAATCAA
GAAGAGAGGT TGGTCAGACT GCAATTAATG CTGTTGGCAA CTATTTGTCT CGATAATAGT
GTGTATTTTT CTATTAAAGG TAGCTTTGAT TGGGACAAAT TTGATTCTGA CGAGATAAAA
AAAGCATTCA AATTTGCAGT TGAAAGAATC GAAAGTAAGG CAGGTATATT AACGGGTGAA
ATATTAAATA AACTTTCTCC CGGAATGGCT GAAAGCTTTG CAAATATAGT GCAGTCCCAG
AGCATATTTG AGGATAATAA AAAAGCAGCT TTGGATATAA TTAGAAATAT AGACCTGTTT
GGCTTGGAAG AAAGAAAAAA TGAAATAATC GAGCTGAAAA AGAGAAGTGA TCTGACAGAA
GGAGATGTTG AATTATTAAA TCGGGAATTA AGCGGTATTG TATCGAATAT AGCTATAATG
AAAAAAGGTT TGTAA
 
Protein sequence
MANLFPDDLI EEIRVSNDIV GIISEYVKLE KKGKNFFGKC PFHNEKTASF SVEPVKQIFH 
CFGCGKGGNV IHFIMSIENL EFPDALRFLA DRAKILIPDM IEGNRNDEKA GLKRELLQIN
LEAARFFRDN LNNDKNKLPN SYLINRKIQK NTVAKFGLGY AEDRFDTLYK HLKAKGFSDT
SIKNSGLVIY KEESGNIYDR FRGRIMFPIF DIRGNVIAFG GRVLDSSQPK YMNSPETEVY
HKGKHLYALN FAKNTCSRRL ILAEGYMDVI SLHQSGILNS VAPLGTALTE NQGRLLKKYT
EEIVLSFDSD SAGRAAAFRS LDLLNEIGCN VKVLTIPSGK DPDEFIKAYG VAEFKRLVDR
SESLLDFKLG SLKNDIDTST NEGKVRFLDK AVLILDKIDN NVEKELYVKK LSEELGVSTQ
SIFSEMAKQQ RNSVIKVRQA ASNKNFSRNQ IRKSTVVKNQ EERLVRLQLM LLATICLDNS
VYFSIKGSFD WDKFDSDEIK KAFKFAVERI ESKAGILTGE ILNKLSPGMA ESFANIVQSQ
SIFEDNKKAA LDIIRNIDLF GLEERKNEII ELKKRSDLTE GDVELLNREL SGIVSNIAIM
KKGL