Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0512 |
Symbol | |
ID | 7309383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 592045 |
End bp | 592548 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643607442 |
Product | peptidase A24A prepilin type IV |
Protein accession | YP_002504874 |
Protein GI | 220927965 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000304579 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAAAT ACATAATTCT GTTTTTACTT GTACTGTTTT CAGTAGTGAG CGACATAAGA ACATCAAAAA TCAGAAACAT ACATACAGCA TCAGCTATGC TTGCCGGCTT GGTAATAAAT ACACATCTTT CAGGTATGTA TGGTTTTAAG GAAAGTATGG AAGGTATTAT TCTTCCGGTG TTTTTATTTG GGATATTTTT TTATGCAAGG CTCATAGGAG CTGGGGATAT AAAGCTGTTC AGCAGTATTG GGGCTGTTTT CGGAATAGAC TTCGTAATTA TGGTTATAGC GTATTCTTTT TTAATTTGTG GTTTATATTC ACTAGTTATG TTGTGTATAA AAAGAAAATT TGTAAGCACA TTTGTTCCAT TTATAAAGGA AATTCGACTA TGTTGTTTGA CACTGAACCT TTCTGTTTTT GAGAATAAAA CAACCCGCAC ATATATCAGG ATGTCTCCTG CAATTGCAGC GGGTTGTGTG TTTCAAGTAT TATTAAATCT ATAG
|
Protein sequence | MIKYIILFLL VLFSVVSDIR TSKIRNIHTA SAMLAGLVIN THLSGMYGFK ESMEGIILPV FLFGIFFYAR LIGAGDIKLF SSIGAVFGID FVIMVIAYSF LICGLYSLVM LCIKRKFVST FVPFIKEIRL CCLTLNLSVF ENKTTRTYIR MSPAIAAGCV FQVLLNL
|
| |