| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0503 |
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| Symbol | |
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| ID | 7312108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 583358 |
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| End bp | 584593 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643607433 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002504865 |
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| Protein GI | 220927956 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.731601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAGG AACTCATCAA TGAAATAAAG ACCTCAATTA ATGATAAAAT TGATTTAAAG
AGAAATTTCA CAGATGATGA AATTAATGAG TTAACAGTCC GCACGGTATT GGATAAATCC
AAACAAGTTT TTCTCAGCTC AACCGAAAAA AAGCAAATTA TTGAATCCGT ATTTAACTCA
CTCCGCAGGT TGGATATATT ACAGCCTATT CTCGATGATA ATCAAGTAAC TGAAATAATG
ATAAACGGTC CCAATGATAT TTTTATTGAA AAGAAGGGTA AAATAAGCCG ACTAGAAATG
TTTTTTGAAT CCCAACAAAA GCTTGAGGAC ATAATACAGA TCATGGTGAC GGCGGTAAAT
AGAACGGTTA ATGAATCAAA TCCAATTGTT GATGCCAGAT TGAAGGATGG ATCAAGGCTT
AACGTAGTAC TCCCTCCTAT TGCAATAAAT GGTCCTATTG TAACTATCAG AAAGTTCCCC
GGAAAACCTA TTGATGTGAA AAGTCTTATT GAACTGGGTT CATTGACCGA AGAGGCAGCT
GATGCATTAA AAATTCTTGT AAGGGCAAAG TACAATATTT TTGTGGCAGG AGGGACAGGG
GCTGGGAAGA CAACTTATCT CAATGTACTT TCAAACTTTA TACCAGCAGA TGAAAGAATA
ATAACCATTG AAGATTCAGC CGAGCTGCAA ATAACAAATA TATCAAACCT TGTCAGACTT
GAAACAAGAA ATGCAAATGT AGAGGGACGA GGAGAAGTGA CTATAAAAAA TCTTATAAGA
ACAGCCTTGC GTATGAGGCC AAACCGAATA ATCGTCGGAG AAGTAAGGGG GGAGGAAGCA
ATTGATATGC TGGCTGCAAT GAATACAGGG CATGACGGAT CTCTTAGTAC CGGACATGCA
AATTCATCCC AAGATATGTT TTCACGTCTT GAAACAATGA TTCTGAGTTC GGCACCTCTC
CCTCTTGAGG CAGTAAGAAA GCAAATAGCT TCAGCAATTG ACATTATCAT ATTTCTTTCA
AGGCTCAGGG ACGGGTCCAG GCGGACAATG GAGATTTCAG AGGTACTGGG AATAGAGAAT
GGATTAATAA GACTAAACCC GCTTTTTGTA TTTGAAGAAA CATTTCAAGG AGACAAAAAA
CCAATTAATC TTGTTTGCGG ATGTTTGAAA AGAACATTAA ATCCATTAAT TAATAAACAT
AAAATTATAA ATTCGGGGAT TTATAATGAT TTTTAG
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| Protein sequence | MKQELINEIK TSINDKIDLK RNFTDDEINE LTVRTVLDKS KQVFLSSTEK KQIIESVFNS
LRRLDILQPI LDDNQVTEIM INGPNDIFIE KKGKISRLEM FFESQQKLED IIQIMVTAVN
RTVNESNPIV DARLKDGSRL NVVLPPIAIN GPIVTIRKFP GKPIDVKSLI ELGSLTEEAA
DALKILVRAK YNIFVAGGTG AGKTTYLNVL SNFIPADERI ITIEDSAELQ ITNISNLVRL
ETRNANVEGR GEVTIKNLIR TALRMRPNRI IVGEVRGEEA IDMLAAMNTG HDGSLSTGHA
NSSQDMFSRL ETMILSSAPL PLEAVRKQIA SAIDIIIFLS RLRDGSRRTM EISEVLGIEN
GLIRLNPLFV FEETFQGDKK PINLVCGCLK RTLNPLINKH KIINSGIYND F
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