Gene Ccel_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0500 
Symbol 
ID7309375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp580364 
End bp581164 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content37% 
IMG OID643607430 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002504862 
Protein GI220927953 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.06724e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT CGTTTTCAAC ATTGGGATGT CCGGGATGGA GTTGGGAGGA TATGCTTTCA 
ACTGCAAAGG ATATAGGATT TGATGGTGTT GAGGTCAGGG GTATTGGTAA TGAGCTTTAT
GTACCTAAAG TAAAACACTT TTCAAACGAT AATATTGAAT TGACAAAGAA AAAATTAAGC
AAAATAGGCC TTGAAATACC TTGCTTGACT TCTGCGTGTT TTTTATTTGA CAAGGAAAAT
ATAGATAAAC ATATAAAAGA AGGTATTGAT TATATTAATT TGGCTGAAAA GCTTGGAACA
CCGTATATAA GGGTTTTGGG TGATGCCCAG CCGCAGCCCT CTGATATAGA TATTGATTTT
GTTGTTAAAA ATCTGAAAAA TCTTGCAGCT GCGGCAAAAG AAAAAGGTGT TAAGCTATTA
GTAGAAACCA ATGGTGTATT TGCAGATTCA AAGGTTATGA AATCATTGCT GGATAAAGTT
GACTCTGACA GTGTCGGAGT ACTTTGGGAC ATTCATCACC CTGTCAGATT TTTCAATGAG
TCGTTGGAAT ACACATACGG CAATCTGAAG GAACATATAT GTTTTGTACA CATTAAGGAT
TCGATTATGA TGGATGGTAC GGTCAAGTAC AAAATGACGG GTTATGGTGA TATTCCAGTG
AAACAGGCTG TCGAGCTTCT TAATCAAAAC GGATATAATG GATATGTTTC ACTTGAATGG
GTAAAGAGAT GGTGCCTTGA CCTCGAAGAG CCGGGAATTG TTTTTGCTCA TTTTGCAGGG
TATATGAAGA GTATAATATA A
 
Protein sequence
MKISFSTLGC PGWSWEDMLS TAKDIGFDGV EVRGIGNELY VPKVKHFSND NIELTKKKLS 
KIGLEIPCLT SACFLFDKEN IDKHIKEGID YINLAEKLGT PYIRVLGDAQ PQPSDIDIDF
VVKNLKNLAA AAKEKGVKLL VETNGVFADS KVMKSLLDKV DSDSVGVLWD IHHPVRFFNE
SLEYTYGNLK EHICFVHIKD SIMMDGTVKY KMTGYGDIPV KQAVELLNQN GYNGYVSLEW
VKRWCLDLEE PGIVFAHFAG YMKSII