Gene Ccel_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0487 
Symbol 
ID7309362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp558764 
End bp559969 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content39% 
IMG OID643607417 
Productpeptidase S11 D-alanyl-D-alanine carboxypeptidase 1 
Protein accessionYP_002504849 
Protein GI220927940 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.911205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAA CTGCAAGAGT AGTTTTAATA GTTCTGATTA TTTTATCGAA CCTGCTATGT 
GCCAATATGG TAAAAGGAGA TGATACAAAT GATGATGGAC CCATAACAAA CGACATATTG
AAAAGCGAGA GCTGGGAGGT AGCAGGGAAT CAGGCTCCAA GAGTTTCTGC AGGTGCTGCA
ATCGTAATGG ATGTACAAAG CGGCAGGGTA CTGTATGAAA AAAATGCCTA TAAGCGAAGT
TCCATTGCAA GTACCACTAA GATAATGACT GCTATAGTTG CCCTTGAAAA CGGTAGTGAT
GGTGAGGACG TTATCGTAAG CAAAAAGGCA GCATCCATTT GGGGGTCCAG AGTAGGGCTT
AAGATGGGAA AAATATATAA ACTGGGAAAT CTTCTTAATG CATTGATGAT TAGGTCAGGC
AATGATGCTG CTATTGCGAT AGCAGAGCAT GTAGGTGGTT CTGTGGAAGC CTTTGCTGAA
ATGATGAATA GAAAGGCAGC TGAAATAGGA GCTACCAATA CAAACTTTGT AACGCCTCAC
GGATTGGATG CCCCCCAGCA TTATTCAACT CCTTACGACC TTGCATTGAT TACCCAATAT
GCATTAAAAA ATAAGAAGTT CTGTAAAATA GTCAGTACAA AATCCTCAAC CTTTGAAGGA
AATCCAATAA ATAATACAAA CGAGATGCTA AGTCTATACC CGGGAGCAGA CGGAGTAAAA
ACAGGCTATA CCGGTCAGGC AGGAAGATGT CTTGTAACTT CTGCTACTCA TAGTGGATGG
AGAATAATAT CAGTAGTGTT AAATTGTTCC ACGAGATCTG TAAGGGCTCA AAGCAGTAAA
ATATTACTGG ATTATGCATT TGGCAACTAT AAGATATATG AATATTTAAA AAAGGGTGGG
CAGATTTCCC AAGTTGGTAT ACATAAAGGA TTAAGCAATG CGGTTGGAAT ATGTTCAGAT
AAAGATATTT CGATTCCATT GAAAAAGGAT GAAGCCGATA GGATTAAGGT TGAGTATGAT
ATTCCTAAAA CACTGGAAGC ACCGATACAA AAAGGATGCA GGATAGGTAC CGTTAATTAC
GTACTGGATG GAAAGGTGTT GGCTTCCACT GATGTAAAAT CCACTGCTAC AATAAAGAGA
AAGGACTTCT ACTATTATTT TGACAGGATA TTTAAAACCT GGGCAAGACT TGTACATCAA
CATTAA
 
Protein sequence
MKKTARVVLI VLIILSNLLC ANMVKGDDTN DDGPITNDIL KSESWEVAGN QAPRVSAGAA 
IVMDVQSGRV LYEKNAYKRS SIASTTKIMT AIVALENGSD GEDVIVSKKA ASIWGSRVGL
KMGKIYKLGN LLNALMIRSG NDAAIAIAEH VGGSVEAFAE MMNRKAAEIG ATNTNFVTPH
GLDAPQHYST PYDLALITQY ALKNKKFCKI VSTKSSTFEG NPINNTNEML SLYPGADGVK
TGYTGQAGRC LVTSATHSGW RIISVVLNCS TRSVRAQSSK ILLDYAFGNY KIYEYLKKGG
QISQVGIHKG LSNAVGICSD KDISIPLKKD EADRIKVEYD IPKTLEAPIQ KGCRIGTVNY
VLDGKVLAST DVKSTATIKR KDFYYYFDRI FKTWARLVHQ H