| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0480 |
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| Symbol | |
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| ID | 7309357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 550625 |
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| End bp | 552004 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643607410 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002504842 |
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| Protein GI | 220927933 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000047898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCTT TTAACTGTTC AGAGCTGATT GAGGCCGTAG GAGGAAAGCT GCTTTGGGGA
AAACCGGGAA TCAATTTTTA CGGCGTAACA ACTGACTCCA GAAAGGTTAC AAAGGATAAT
TTATTTATAC CTCTAATTGG GGAGAAATTT GACGGTCATG ATTATATAGA GCAGTGCTTC
AATGCGGGAG CGACCGTTTG CCTGACCTCT AAACAAATAC CGACCGTTAC AGGCTGCACT
GCGATTTTGG TGGATGATAC CGCCAAGGCT TTACGGGATT TAGCTGCATG GTATCGCAGA
AAATTTGATA TACCTGTAGT GGGCATAACT GGAAGTGTTG GCAAAACCAG TACAAAAGAC
ATGGTATCAT GTGTGCTGTC TCAACAATAT AAGGTTTTAA AGACACAGGG CAATTTTAAT
AATGAAATAG GCCTCCCGTT GACTGTTTTT AATATTGATT ATAGCCATGA AGCTGCTGTA
ATAGAGATGG GAATGAGCGG TTTTGGAGAA ATCAGCCGGC TTACTGCGAT TGCCAGACCT
CATATTGCTA TAATTACCAA TATAGGTGTT TCACATATTG AAAAACTTGG CTCCCAAGAA
GGAATTTTAA AGGCAAAGCT GGAAATCCTT GAAGAACTTG ATAAGGATGG GTTAGTTGTA
TTAAACGGAG ACGATCCGTT ACTAAGCTCA TTGAAAGGAA AACTCTCTTT CAGGACTGTT
TTCTATGGAA TGAACGTCGG CAGCGATTAC ACTGCCCTAA ACTACCAACC CAAGGGGGAA
CAGGGAACTA CCTTTGAGAT ATCAGTTAAC GATTGCTTGT ATAATGTTGA AATTCCTGTT
CCGGGTATAC ACAATGTATA CAATGCACTT GCAGCTATTG CCGCAGGAAT TGAAATGAAG
ATTCCTATGG AAATTATTAT TAATGGAATT AAACAGTTCA GTCCGGGAAA TATGAGGCAG
AGTATAATAA ACCATAATGG TATAAAAATT ATAAATGATG CCTATAATGC AAGTCCTCAG
TCCATGCAGG CAGCAATCAA TGTACTCCAA GAAATATCAT CAGAATCACG AAGTATTGCT
GTTTTGGGTG ATATGTTTGA GATGGGTGAT ATGTCAAAGG ATATGCATTA CTCAGTAGGA
GACTTTATAA AGAACAAGAA GATAAACTAT CTGGTTACTG TAGGACTGGA TTCCAGAATG
ATATCACAAG CTGTGGCTGA TTATGGCAAT AGTCAGACAG AAATACATCA TTTTGAAAAC
AATAAGGAAG CACTTAAATA TATTCTGGAA ATAGTAATGC CCGGAGATTA CATATTGATT
AAAGGCTCAA GAGGAATGAA AATGGAAGAA ATCGCTGACG GAATAATGAA GTCAGAATGA
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| Protein sequence | MISFNCSELI EAVGGKLLWG KPGINFYGVT TDSRKVTKDN LFIPLIGEKF DGHDYIEQCF
NAGATVCLTS KQIPTVTGCT AILVDDTAKA LRDLAAWYRR KFDIPVVGIT GSVGKTSTKD
MVSCVLSQQY KVLKTQGNFN NEIGLPLTVF NIDYSHEAAV IEMGMSGFGE ISRLTAIARP
HIAIITNIGV SHIEKLGSQE GILKAKLEIL EELDKDGLVV LNGDDPLLSS LKGKLSFRTV
FYGMNVGSDY TALNYQPKGE QGTTFEISVN DCLYNVEIPV PGIHNVYNAL AAIAAGIEMK
IPMEIIINGI KQFSPGNMRQ SIINHNGIKI INDAYNASPQ SMQAAINVLQ EISSESRSIA
VLGDMFEMGD MSKDMHYSVG DFIKNKKINY LVTVGLDSRM ISQAVADYGN SQTEIHHFEN
NKEALKYILE IVMPGDYILI KGSRGMKMEE IADGIMKSE
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