Gene Ccel_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0401 
Symbol 
ID7309281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp452853 
End bp453287 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content32% 
IMG OID643607329 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_002504766 
Protein GI220927857 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00256167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGCTA TTACTTATAT CATCAACGAT CCTGTAAACG TATCTGATAT CGTTACTCTA 
ATTCTTGATT ACATCACGTT GGGGAATAGT GTATCTGAAG ACACACTATT TGAAATAAAG
GTCATATTAA ATGAGTTGAT TGTAAATGCA TTACAGCACG GAAATAAAAG TAACCACAAT
AAGCATACTT ACGTAACATT TAAGTTAATT GATGATGATT ACCTATATGT GAGTGTAATG
GATGAAGGCA GCGGATTCAA CTATTCGAAA TTCTCTTTGG TTAAGGACTT AGATTGTACA
AATAGTCTGT ATTGTGATCA TGGCAGAGGA TTGGTTATTG TAAGACAACT ATGTGATAAA
ATAAAGTTTA ATAAATGCGG TAATAAAGTA TCAATTATTA AAAACCTCCA CTTACAGCAA
CCCAAAAACA TATAA
 
Protein sequence
MRAITYIIND PVNVSDIVTL ILDYITLGNS VSEDTLFEIK VILNELIVNA LQHGNKSNHN 
KHTYVTFKLI DDDYLYVSVM DEGSGFNYSK FSLVKDLDCT NSLYCDHGRG LVIVRQLCDK
IKFNKCGNKV SIIKNLHLQQ PKNI