| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0400 |
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| Symbol | |
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| ID | 7309280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 452033 |
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| End bp | 452782 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643607328 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_002504765 |
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| Protein GI | 220927856 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0319697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA AAACTCAAAA TACATTAAAT TATGACGAAG TACAGTTATT TTCTCAATAC
ATAAGTACAG GGAACCTGGA ATATAGAAAT GAGATTGTAT CAAATTACCT TAGTCTTGCA
GAATACTTGT CCAAAAAGTT TCTAAACAGA GGAGTAGATT TTGATGATAT ATATCAAGTG
GCTTGTCTTG CCTTAATAAA CGCTGTAGAA AGATTCAGTC CGGACAAGGG AGTAAAATTT
ATAAGTTTTG CAACACCAAC AATTCTAGGT GAAATAAAGA GATTTTTCAG GGATAAGAGT
ACAACAATAA AGATTCCCAG AAGAATTTAT GAATCCCGGC AGGGAGTAAA TAAGGCTAGG
GATGAGCTTA CCCAAAAGTT AAGCAGAGTA CCGAGGGCAG ATGAAATAGC TGAATATATG
GGTATACCTG TTGAAACAGT ACTTGAGATA ATAGAAGCTG GAAGTTCAAC TATAGTTAAA
TCTCTGGATC AGACAATTAA CCAGGATAAT GATGCTGAAT TGGGCGATAC TTTAGGATAC
GACGAGAAAA CATATGAAAT GATAGACAAT AAAGACTTTC TCGAAAAGGT ATTAATATCA
TTTAATGATG TAGAAAGACA ATTTGTAACA TATAGGTACA TCCAAAATAA GACTCAGAAA
CAGATAGCTG AAATACTTGG AGTATCCCAG ATGTATGTTT CAAGAATGGA AAGGAAAATA
CTCGATAAAT TCAGAAAATA TCTCAAGTAG
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| Protein sequence | MENKTQNTLN YDEVQLFSQY ISTGNLEYRN EIVSNYLSLA EYLSKKFLNR GVDFDDIYQV
ACLALINAVE RFSPDKGVKF ISFATPTILG EIKRFFRDKS TTIKIPRRIY ESRQGVNKAR
DELTQKLSRV PRADEIAEYM GIPVETVLEI IEAGSSTIVK SLDQTINQDN DAELGDTLGY
DEKTYEMIDN KDFLEKVLIS FNDVERQFVT YRYIQNKTQK QIAEILGVSQ MYVSRMERKI
LDKFRKYLK
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