| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0312 |
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| Symbol | rpoB |
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| ID | 7309203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 357744 |
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| End bp | 361484 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643607242 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002504679 |
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| Protein GI | 220927770 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAAC CCGTAAAATT GGGTAGAAAC ACCAGGATGA GTTATTCCAA AATACGAGAA
GTACTCGAAA TGCCAAATTT GATTGAGGTT CAAAAGAACT CATATCAATG GTTTTTGGAT
GAAGGTCTTC GTGAAGTTTT CAGAGATATA TCCCCGATAA CTGATTATAC TGGAAACTTG
ATATTGGATT TTGTGGATTA TTCGCTTGAT GATACGCCGA AGTATAGTGT CGAAGAATGT
AAGGAAAGGG ACACTACATA CTCAGCACCC CTAAAGGCGA AGGTAAGATT AATTAACAAG
GAATCCGGAG AAGTAAAAGA GCAGGAAATT TTTATGGGTG ATTTTCCTCT CATGACCGAC
ACTGGAACCT TCATAATTAA TGGTGCAGAG CGTGTAATTG TCAGCCAGTT GGTGAGATCC
CCTGGTATAT ACTACTCAAT GAAGTTTGAC CGTGTTGGTA AAAAGCTATA CTCGAATACA
GTTATTCCTA ACAGAGGGGC ATGGCTTGAG TACGAAACAG ATTCAAACGA TATACTTTCA
GTCAGAATAG ACAGGACAAG AAAGTTGCCT CTAACTGTAC TGCTCAGAGC ATTAGGGTAC
GGTACTGACT TCGCTATTAC GCAATTGTTG GGTGAAGATG AAAGAATTCT TGCGACAATA
CAAAAGGATA ATGCAAAAAC TACCGAAGAA GGATTACTTG AGATATACAA GAGGCTGAGA
CCTGGGGAGC CGCCTACTGT AGATAGTGCA AGATCCCTAC TCAATAGTTT GTTTTTTGAC
CCCAAGAGAT ATGATCTTGC AAAATTTGGT AGGTTTAAAT TTAATAAAAA GCTGTCCGTA
GCAAATCTCA TCACCGGGCA GGTTGCAGCA GAAAATATAG TTTCGGCCGA GACCGGCGAA
ATATTGGTAA CCGAAGGTGA ATTAATTGAG AGAGAAAAAG CAGTAGAAGT ACAGAATTCA
GGTGTTAATG TAGTACACCT GTCAGTTGAA GGAAAGTCTA TAAAAGTAGT CGGAAATAAT
ACGGTTGATA TACGTGCCTT TATTGATTTT GATGTATCTG ATATAGGTAT AACCGAAAAT
GTACAGTATG CCGTACTAAA GGAAATTCTT GAAAGTACAA GTGGCGAAGT GCAGATTAAA
AAGGCTCTCG GAGAGAGAAT TAATGACTTG ATTCCTAAAC ATATCACAGT AGAGGATATA
ATTTCTTCCA TAAATTATAT TATTAACCTT GATTATGGAA TTGGATCTAT TGACGATATC
GATCACTTGG GTAACAGAAG ACTTCGTTCA GTGGGAGAAC TTCTTCAGAA TCAGTTCAGA
ATAGGTCTCT CAAGAATGGA AAGAGTTGTA AGAGAGAGAA TGACTATACA GGATATAGAT
ATAGTTACAC CTCAGGCATT AATAAATATA AGACCCGTTG CAGCTGCTAT AAAGGAATTC
TTTGGAAGCA GTCAGTTGTC ACAGTTTATG GATCAGACAA ATCCTCTTGC CGAGTTAACA
CACAAGAGAA GGCTCAGTGC CTTGGGGCCC GGTGGTTTGA GTAGAGAGAG GGCCGGCTTC
GAAGTCCGTG ATGTTCATCA CTCTCACTAT GGCCGAATGT GTCCGATTGA GACACCTGAA
GGTCCGAACA TTGGTTTGAT AGGTTCATTA AGTACCTATG CAAGAGTAAA TGAGTACGGG
TTTATAGAAG CACCGTTTAG AAAAGTTGAT AAGAAAAACA GAAAAGTTAC AAATGAAATA
GTATACCTCA CTGCTGACGT TGAAGACCCA TTTGTTGTTG CTCAGGCAAC AGAACCTCTT
GATGAAGAGG GCAAGTTTAT TTCAAATAAG GTAGTAGCAC GTATCAGACA CGAAATCTTA
GAAGTTGAGA GCAATAAAAT TGACTTTATG GACGTTTCGC CAAAGCAGAT GGTATCTGTT
GCTACGGCTA TGATTCCGTT CCTTGAAAAT GACGATGCCA ACCGTGCACT GATGGGCTCA
AACATGCAGC GTCAGGCTGT TCCATTGATA AAGGCTGATT CCCCTATTAT TGGTACAGGT
ATAGAGTACA AGGCAGCAAG AGACTCAGGA GTCTGCGTTA TTGCAAGAAC TTCGGGTGTA
GTAGATAAGG TATCTGCCAG TGAAATAGTT ATTAAAACTA AGAGCGGGCA AAAAGATTCC
TACAAACTGC TTAAGTATAT GCGTTCAAAC CAAGGTACCT GTCTTAATCA AAGGCCTATA
GTAAGAAAAG GCGAGGTAGT AGAAAAAGGC GACATTATTG CTGACGGACC GTCAACAGAT
AATGGAGAAA TAGCTCTTGG GAGAAACGTT CTCATAGGGT TTATGACTTG GGAAGGTTAT
AACTACGAAG ATGCTATACT TATAAATGAA AAGCTGGTTA AAGAGGATGT TTATACATCC
ATACACATAG AGGAGTATGA AGCGGAGTCA AGAGATACTA AGCTCGGTCC TGAAGAAATC
ACAAGAGATA TTCCAAATGT GGGAGAGGAA GCACTTAAAG ACCTTGACGA CAGAGGAATT
ATTAGAATTG GTGCAGAGGT TCGTTCAGGA GATATTCTCG TTGGTAAGGT TACTCCAAAG
GGAGAGACAG AACTTACAGC GGAAGAACGC TTGCTTAGAG CGATCTTTGG TGAAAAGGCA
AGAGAAGTCC GTGATACATC CTTGAGAGTT CCTCATGGAG AATCTGGTAT TATTGTCGAT
GTAAAGGTAT TTACTCGTGA GAATGGTGAC GAACTGCCAC CGGGAGTAAA TCAGCTTGTT
AGATGCTATA TTGCTCAGAA AAGAAAAATT TCTGTTGGTG ACAAGATGGC AGGACGACAT
GGTAATAAGG GTGTTATTTC AAGAATACTT CCTGAAGAAG ATATGCCGTT TTTGCCTGAT
GGTACGCCAC TGGAGATAGT TTTGAACCCG TTGGGCGTTC CATCTCGTAT GAATATCGGT
CAGGTACTTG AAGTGCATTT GGGATATGCG GCTAAAGCAT TAGGCTGGAA AATAGCAACT
CCTGTATTTG ACGGAGCGAC AGAGGAAGAC ATCAGGGAAA CTCTTATTAA GGCAGGAAAA
GATCCGGATG GAAAAACGGT ACTTTACGAT GGCAGAACCG GTGAACCTTT TGACAACAGG
GTAACCGTAG GTTACATGTA TTACCTCAAG CTAGCCCACT TGGTTGATGA TAAGATACAT
GCCCGCTCTA CTGGACCATA CTCTCTTGTA ACACAGCAGC CTTTAGGCGG TAAGGCACAG
TTTGGCGGTC AGAGATTTGG AGAAATGGAA GTTTGGGCTC TTGAAGCATA CGGAGCTGCC
TATACATTGC AGGAAATACT TACGGTTAAA TCTGACGACG TTGTAGGTAG AGTTAAGACA
TACGAATCCA TAGTTAAGGG CGAAAACGTT CCTGAACCTG GAATTCCTGA GTCATTCAAG
GTTCTTATAA AAGAGCTTCA GAGTTTGGCA CTCGATGTTA AGGTTTACTC TGAAGAACAG
GAAGAAATTG CAATAAAAGA ATATGTTGAA GATGATCTTG AAGATTTGAA TGTTAACATC
GAAGGCAGAG AAGACGAAGT TATTCTGACA AATGATTTTG ACAACGAATT GAGAGAAGAT
GTTCTTGAAG AGGAGCTGGA CATTGATGAT TTAGATATTG GATCAATCAG TACCGGTGAT
AACTTGGAAG AAGAATTAAC TGAAGAATTA TTTGCTGAAG ATGATCTAAG CGATGACTTT
GAAGACGACG AAGATTTATA A
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| Protein sequence | MVQPVKLGRN TRMSYSKIRE VLEMPNLIEV QKNSYQWFLD EGLREVFRDI SPITDYTGNL
ILDFVDYSLD DTPKYSVEEC KERDTTYSAP LKAKVRLINK ESGEVKEQEI FMGDFPLMTD
TGTFIINGAE RVIVSQLVRS PGIYYSMKFD RVGKKLYSNT VIPNRGAWLE YETDSNDILS
VRIDRTRKLP LTVLLRALGY GTDFAITQLL GEDERILATI QKDNAKTTEE GLLEIYKRLR
PGEPPTVDSA RSLLNSLFFD PKRYDLAKFG RFKFNKKLSV ANLITGQVAA ENIVSAETGE
ILVTEGELIE REKAVEVQNS GVNVVHLSVE GKSIKVVGNN TVDIRAFIDF DVSDIGITEN
VQYAVLKEIL ESTSGEVQIK KALGERINDL IPKHITVEDI ISSINYIINL DYGIGSIDDI
DHLGNRRLRS VGELLQNQFR IGLSRMERVV RERMTIQDID IVTPQALINI RPVAAAIKEF
FGSSQLSQFM DQTNPLAELT HKRRLSALGP GGLSRERAGF EVRDVHHSHY GRMCPIETPE
GPNIGLIGSL STYARVNEYG FIEAPFRKVD KKNRKVTNEI VYLTADVEDP FVVAQATEPL
DEEGKFISNK VVARIRHEIL EVESNKIDFM DVSPKQMVSV ATAMIPFLEN DDANRALMGS
NMQRQAVPLI KADSPIIGTG IEYKAARDSG VCVIARTSGV VDKVSASEIV IKTKSGQKDS
YKLLKYMRSN QGTCLNQRPI VRKGEVVEKG DIIADGPSTD NGEIALGRNV LIGFMTWEGY
NYEDAILINE KLVKEDVYTS IHIEEYEAES RDTKLGPEEI TRDIPNVGEE ALKDLDDRGI
IRIGAEVRSG DILVGKVTPK GETELTAEER LLRAIFGEKA REVRDTSLRV PHGESGIIVD
VKVFTRENGD ELPPGVNQLV RCYIAQKRKI SVGDKMAGRH GNKGVISRIL PEEDMPFLPD
GTPLEIVLNP LGVPSRMNIG QVLEVHLGYA AKALGWKIAT PVFDGATEED IRETLIKAGK
DPDGKTVLYD GRTGEPFDNR VTVGYMYYLK LAHLVDDKIH ARSTGPYSLV TQQPLGGKAQ
FGGQRFGEME VWALEAYGAA YTLQEILTVK SDDVVGRVKT YESIVKGENV PEPGIPESFK
VLIKELQSLA LDVKVYSEEQ EEIAIKEYVE DDLEDLNVNI EGREDEVILT NDFDNELRED
VLEEELDIDD LDIGSISTGD NLEEELTEEL FAEDDLSDDF EDDEDL
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