Gene Ccel_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0201 
Symbol 
ID7309105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp226370 
End bp227254 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content35% 
IMG OID643607130 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002504568 
Protein GI220927659 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGGATA AAGTTTTGGG CAATAAGAAA GCTATAGTAT TTTTCCTGTT TCCGGCTTTA 
GTTATATTTA TTGGGTTAAT AATTGTACCT ATCATAATGT CAACGTACTA CAGCTTGCAG
GAATGGTCGG GATTTGGCAA AGGTACTTTT ATAGGTCTGC AAAACTATAA AGGACTTCTT
TCTGATCCGA TATTTATAAA AGCTGCAGTA AATTCACTGA TTTTGGCATT TGCATCAGTA
TTTATACAGC TTCCGATTTC GCTACTTTTG GCTCTGACAC TTGCGAAGGG TGTTAAGTTT
GAAAAGAGCT TTGTGACTAT TTATTTTATA CCGGTTATTA TTTCCACAGT TGTTATCGGA
CAGCTTTGGA TGAAAATATA TAATCCTGAT TATGGAATTC TAAATTTATT TTTAAAAAAT
ATTGGACTGG GCTCCCTAGC ATCAGAGTGG CTTGGTGACC CCAAAAGAGC ATTGACTGCT
ACATTTATTC CGATAATATG GCAGTACATC GGATATCATA TGCTTTTAAT GTATGCAGGT
ATTAAATCAA TTTCCACTGA TGTTTTCGAA GCTGCTGTAA TTGATGGATC TTCATGGTGG
AATACATCTA TGAAAATAAC AATACCAATG TTGAAGCCTG TGTTGAATGT TTCGGTAATA
TTCGCTGTTA CAGGTGCACT GAAGGTATTT GATCTTGTAT ATGTTTTAAC AGGTGGGGGA
CCTGCACACG CTAGTGAAGT AATAGGCACA TATATGGTTA GTACAATATT TAAAGGTAAC
CAGTACGGAT ATGGTAGTGC GATGGCCATA TTTGTAATTC TTGAATGTTT TGTATTATCA
ATTCTTGTAG GTTTATTATT CAGAGAAAAG GGGGAAGCAA AATGA
 
Protein sequence
MVDKVLGNKK AIVFFLFPAL VIFIGLIIVP IIMSTYYSLQ EWSGFGKGTF IGLQNYKGLL 
SDPIFIKAAV NSLILAFASV FIQLPISLLL ALTLAKGVKF EKSFVTIYFI PVIISTVVIG
QLWMKIYNPD YGILNLFLKN IGLGSLASEW LGDPKRALTA TFIPIIWQYI GYHMLLMYAG
IKSISTDVFE AAVIDGSSWW NTSMKITIPM LKPVLNVSVI FAVTGALKVF DLVYVLTGGG
PAHASEVIGT YMVSTIFKGN QYGYGSAMAI FVILECFVLS ILVGLLFREK GEAK