Gene Ccel_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0176 
Symbol 
ID7312070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp198225 
End bp200732 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content39% 
IMG OID643607105 
Productpeptidase U32 
Protein accessionYP_002504544 
Protein GI220927635 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAAAA AAATAGAATT ATTGGCACCG GCGGGGACAT ATGATGCCTT TTTGGCTGCA 
ATAGAAAATG GGGCGGATGC GGTATATCTT GGAGGAAAAC TGCTTAATGC CAGACAGTTT
GCAGGAAATT TTGATGATGA CCAGCTGGAA CGGGCATTGG ATTACGCTCA CACCAGAGAT
GCCAGTGTGT TTCTTACTAT GAACACTCTG GTTTTGGATT CCGAAATGCA GGAGGCGGTA
GAATATGTCG CTAAGGCATA TGAAAATGGA GTAGATGCCT TTATAGTACA GGATTTAGGT
TTAGCTGCCA ATTTAAAAAA ACTCATTCCG GGAATTACAC TACATGCCAG TACACAAATG
ACAGTATACA GTACCGAAGG TATAAATGCT TTAGATTCAC TGGGATTTGG AAGAACAGTA
CTGGCCAGGG AGCTGAATCT CGAGGAAATA AAGAAAATTT GCAGACAAAC TCCTCTTGAA
ATAGAAGTTT TTGTACATGG TGCTTTGTGT ATATGTGTTT CGGGACAATG CTATATGAGC
AGTATGATTG GAGGAAGGAG CGGAAACCGC GGGAAATGTG CTCAGCCATG CAGACTGCCA
TATTCCATAA AGAGAGACAG CAGTGAATTT GACAGCGGAT ATCTTATTAG TCCTAAAGAT
ATATGCTATA TAGACCATTT GTCTGACCTT ATTGATGCGG GGGTAACCTC TCTAAAGATA
GAAGGACGAA TGAAAAGTCC TGAATATGTG GCCACGGTAG TTGGCACGTA CAGGAAATAT
CTTGACTTAA TTTATGAGAA AAGAGACTTG TCCCCCAGCA TATCAAGTAG ACATAAAGTA
GAACAGGAGG ATAGGCACAA ACTGCTTCAA AGTTTTAATA GAGGCGGATT TTCTAAGGGT
TACCTTTTAG GAAAAACTGG CCCGGAGATG ATGGCTTATG AAAAACCTAA AAACTGGGGA
ACACCTTTGG GAAATGTGGT TTCGCAGGAC AGAAACACTA ATTCCGTTCT GATAAAGCTT
GAAAATACAC TGGGAATGGG TGACGGAATT GAAATATGGT CCGGCAGTAA GTTTCAGGAA
AGTCCGGGCG GTATAATTAC AAAAATTGTA AAAGATAAGA AATTAGTAAG GAAGGCACAT
AAAGGTGATA CTGTATGGGT TTCAGTTATA AAGGGAAAGG TTCAGAAGGG AAGCAGGGTC
TATAAGACCT CTGATAAAGA AATGCTGGAA CAGGCGGCTG CAACCTATTC AAAGGCAGGT
AGAAAATCAC CAATAAAAGC AAGCTTCACC ATGAAATACG GACAAGTACC GGCATTAACT
TTACAAGATG CATATGGAAA CATTGTTTCA GCAGTAGGAG AGCAATTTCC TCAAAAGGCT
ATAAATAAGC CTTTAACAAA GGATCGAATT CTTGAACAAT TGAAAAAGAT GGGTTCAACA
CCTTTTAATA TAGCGGAGAT TACCCTTGAC CTTGATGAGG GTGCAGTGAT TCCAATAAGT
GAGCTTAATA ATATAAGAAG AAGTGCAGGT GAACAACTGG AACAAAAAAG AATATTGTCC
CTTAAAAAAG AATCAGTGAA CTTTGATAAA AGAACATTTA AATCAATTTC ATATTTCCCG
GGAAATGTTC AAAAAATAAA TATAGATACA AAAATAGCTG CAATGTTTTA TGATTATCCT
GACGGAATGG ACTTTGGGGA CTTGGACGTT GACAGAGTGT ATCTACCGTT TACGGAAATA
ATGGGAAATG AAGGACTTCT GCGGGCAAAA CACATTCATG AGACAGGCAG GGAATTATAT
GCCTATATCC CGGCTGTTAT AAGGGGACAT TACACAGACA TACTGAAAAA AAATCTAAAA
AATGTTTCCC AGACCGTAGA CGGGTTTCTG GCGGGGAGTC CTGCTGTTTT TGAAATAATA
CGGGAAAAGT TGGGTAACAG TGTGCCAGTA GTCGGTGACT ATACTATAAA TATAATTAAC
AGTTATTCTT TGAATAAGTT AAAAGAGCTG GGATTCACCG GAGGAACTCT CTCTTGTGAA
TTGAATCTGT CTCAGATAAC TGAACTGAAA TATCCTGCGG ATTTTGATAC TGAACTTGTG
ATCTACGGTA AAATCCCGGT TATGACCAGC GAATACTGTC CTATAGGCGG AAGTGTGGGA
AAATGTGAAC CCAGAAAGTG CGGCAAGCTT TGTAAAAAAG GGGTTTACAG GCTAAGTGAC
AGAAAGGGTG TTGAATTTAT TGTAAAAAGT GATTGCATTG ACTGCCGCAG CACAATATTC
AATTCCAATG TACTATTTGC TCCTGAGCTT TCAGAACAGA TAAGCAGGAC TGGTGTTAAC
TATTTCAGGT TGAGTTTTGT AGACGAAGGT AAAAAAGATA TTCATAATAT ATGTGCTTTA
TATAGAAGTT TGCTTGAGCA TAAAAAAACA GAACCTGATA TGGAAAAGCT GATTGAAAGG
GTTAAAGCAT CAGGGTTTAC AAAAGGGCAT TTGCAAAAGG GAATATAA
 
Protein sequence
MAKKIELLAP AGTYDAFLAA IENGADAVYL GGKLLNARQF AGNFDDDQLE RALDYAHTRD 
ASVFLTMNTL VLDSEMQEAV EYVAKAYENG VDAFIVQDLG LAANLKKLIP GITLHASTQM
TVYSTEGINA LDSLGFGRTV LARELNLEEI KKICRQTPLE IEVFVHGALC ICVSGQCYMS
SMIGGRSGNR GKCAQPCRLP YSIKRDSSEF DSGYLISPKD ICYIDHLSDL IDAGVTSLKI
EGRMKSPEYV ATVVGTYRKY LDLIYEKRDL SPSISSRHKV EQEDRHKLLQ SFNRGGFSKG
YLLGKTGPEM MAYEKPKNWG TPLGNVVSQD RNTNSVLIKL ENTLGMGDGI EIWSGSKFQE
SPGGIITKIV KDKKLVRKAH KGDTVWVSVI KGKVQKGSRV YKTSDKEMLE QAAATYSKAG
RKSPIKASFT MKYGQVPALT LQDAYGNIVS AVGEQFPQKA INKPLTKDRI LEQLKKMGST
PFNIAEITLD LDEGAVIPIS ELNNIRRSAG EQLEQKRILS LKKESVNFDK RTFKSISYFP
GNVQKINIDT KIAAMFYDYP DGMDFGDLDV DRVYLPFTEI MGNEGLLRAK HIHETGRELY
AYIPAVIRGH YTDILKKNLK NVSQTVDGFL AGSPAVFEII REKLGNSVPV VGDYTINIIN
SYSLNKLKEL GFTGGTLSCE LNLSQITELK YPADFDTELV IYGKIPVMTS EYCPIGGSVG
KCEPRKCGKL CKKGVYRLSD RKGVEFIVKS DCIDCRSTIF NSNVLFAPEL SEQISRTGVN
YFRLSFVDEG KKDIHNICAL YRSLLEHKKT EPDMEKLIER VKASGFTKGH LQKGI