| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0057 |
|---|
| Symbol | rpsR |
|---|
| ID | 7308975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 65010 |
|---|
| End bp | 65303 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643606986 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_002504425 |
|---|
| Protein GI | 220927516 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000101407 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGAC CAAAGAGAGA TAACAGAAGA AACGATAGAG ATTCTTATGA TAAGGGCGAA
GGTAAAGGCG GCATGAGAAT GAGAAGAGTA AAGAAAAAGG TTTGCTCATT CTGTGTTGAC
AAAGCTACTG ATATAGATTA CAAGGATGTT GCTAAAATCA GAAAGTATGT TTCTGAAAGA
GGTAAGATTC TTCCTAGAAG AATATCAGGA AACTGTGCAA AGCACCAACG TCAGTTAACA
GTTGCGGTAA AGAGAGCAAG ACATATTGCT TTACTTCCAT ATACTGCTGA ATAG
|
|---|
| Protein sequence | MPGPKRDNRR NDRDSYDKGE GKGGMRMRRV KKKVCSFCVD KATDIDYKDV AKIRKYVSER
GKILPRRISG NCAKHQRQLT VAVKRARHIA LLPYTAE
|
|---|
| |