Gene Ccel_0056 details

Gene Information

• Locus tag: Ccel_0056
• ID: 7308974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 64293
• End bp: 64721
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643606985
• Product: single-strand binding protein
• Protein accession: YP_002504424
• Protein GI: 220927515
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00000253861
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAG TTTTATTGAT GGGTAGACTT ACGAAAGATC CAGACCTAAG ATACACCAGT 
GGAAACAATA CGGCAGTCGC GAGTTTTACA CTTGCTGTTA ACAGACGTTT TGCCAGAGAA 
GGACAGCCAC AGGCTGATTT CATCAATATT GTTGCATGGG ACAGGAGTGC TGAATTTTGT 
GGAAAGTATT TCACAAAAGG AATGCAGGTT GCTGTTGTTG GTAGGATTCA GACCAGAACG 
TGGGATGATA ATGAGGGGAA GCGTCATTAT GTTACGGAAG TTGTTGCAGA GGAGACTTAC 
TTTGCAGACA GCAAACGTAA TAGCGAAGCT GGTAACAGTG GTTCTACACA GAAAACTTAT 
TCTGAAACCC CTGCTGCATC CGGTGATGGA TTCTATCCAA TGGATGAGGA TGACGAACTG 
CCGTTTTGA 

 

Protein sequence

MNKVLLMGRL TKDPDLRYTS GNNTAVASFT LAVNRRFARE GQPQADFINI VAWDRSAEFC 
GKYFTKGMQV AVVGRIQTRT WDDNEGKRHY VTEVVAEETY FADSKRNSEA GNSGSTQKTY 
SETPAASGDG FYPMDEDDEL PF