| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0052 |
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| Symbol | |
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| ID | 7308971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 57092 |
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| End bp | 60241 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643606981 |
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| Product | SMC domain protein |
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| Protein accession | YP_002504420 |
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| Protein GI | 220927511 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGT TAAAACTTAC AATCAGTGCC TTTGGGCCGT ATGCAGGAAA ACAGTTTATT
GATTTTACTA CCCTTACTGA GCAAATATTC GTAATATCAG GCCCTACAGG TGCAGGTAAA
ACTACCATTT TTGACGCAAT CAGCTTTGCT CTTTTTGGAG AAGCCTCCGG AAGCAGCCGG
GATAGGGACA GCCTTAGAAG TGATTTTGCA GAACCGGACA CGGAAACATT TGTTGAGTTG
GAATTTGAAT TAAAAGGCAA AATATATAAA ATAAGGAGAA TGCCCCAACA GCAGCAAAGG
AAGCTAAGGG GAGAGGGTTA TACATTAAGA AATGCCGATG CGGAGCTTTT GATGCCGAAT
GGAACGCTTA TTACAAAAAT TGTAAATGTA GATGAAAGAA TAAATCAGCT TCTTGGTATT
GATAAATCAC AATTCAAGCA AATTGTAATG CTTCCCCAGG GCGAGTTCAG AAAGCTGCTG
GAATCTGACA GCAGTGATAG GGAAGTTATA TTCAGAAAGA TATTTGGAAC AGAGGATTTT
GCCGAAATTC AGAAAAGGAT AGATGATGAC AGGGCAAGCT TAGAAAAGTC TGTTCATGAT
TTGAAAACAC AAATAAATAC CCACATAAGT CATTTTGATG TAGGTGAAGA CCAAACATTG
GTTGACATGA GGAATAGCAA AAATATAAAT CTGGAGCAAT TTATTTATTC TGTTGAACGG
CTGCTGCAAA AGGATAAATC TATAATAGAT GAAATTAAGG CGGAGTTAAC TGAAACGATA
AAAGCACAGG GAATGCTCAA GGAAGAGATT ACAAAATGCA CAGAGGTAAA CAGAAAGCTT
TCAGACAGGG AACAAACAAA ACAACAGTAT GAGGCTCTTT TGTCAAAGGG TAACGAATAC
AGTCAAAAGG AAAAAAACCT CGAATATGCA AGAAAAGCCC TGCCCATAAG TGAAGTTGAC
GAGCAGTGCA GAAAAGTAAA GCAGACGTTG GAAGTAAAAG CCGGCGAATT GGAACTGGCA
AGGCAGGAGC TTGAGAAAAG GACTTGTGAG TTTAAAAGTA TAGCGGAAAG CTTAAATACC
TATAAAGATT TGGAGCCGGA GAACAAAAAG AATGAGACCG AGCTTGCATT ATTAGAGAAA
ATGCTTCCAA AGGTTATCGA ATATGAGAAG GGGTTAAAAC ATTTAAATGC TGCCCGAGCA
GAATACACTC AATTGACAGG AGAATTTGAG AGGATTCAGA GGGAGCTTGA GACAAATAAA
ATAAAGGAAA GTCAACAGGC GGAAACTCTA AAACTGATTT ATACTACCGA GGCTGAATGT
ATAAGCCTTG AGAAGCAAAT ATCAGAAAAC AGAAAGCTGC TTATAGAGCT TGATGGAATC
AGAAAGTTGA TGGGGATATG TCAGGAAGAA CAAAACAGTC TTGAAAACAA GAGAGCGGAA
TTTGCTTCCT TTGAAAAGAA CTTTTGCGAT TTCAGGAGCA GGCTTGAAGT GATGGAGGAT
AATTATATAC GGGGGCAGGC AGGAATTCTT GCCGGAACAT TGAAAGAGAA TACTCCCTGT
CCTGTTTGCG GAGCCTATGA CCATCCAAAG CCCGCAGAAA TGCCTTCTAG TATTCCTTCT
CAAGAGCAGA TAAGGGATAG CAAAGCAGAG TTTTCAAAAT TAACGGAACT TAGGACGGAA
AAGTCAAAGG CTATTTCTGA ATTAAACGGA AGTGTAGAAA GCAAATACAA AGAGATAATT
ATCAGACTCA AAGCACTTGA TGATATTATA AAAATAGACA ATTATGCGGA ATTGGTGGGA
AGTGGACGTT TTGAAACGGT ATTGGGGCAA ATAAACGCAA CGGGAACCGG ACTTAAGGAG
AAAACCGTTG AATTGAAGGC TCAGTACAAT TCAAAAAAAG AGTTTACAGG CAAAAAGGAC
GCATACGAAA AGGAACAAAC ACAAATCCGT GATAAGGTTA AAATACAGGA AGAATCTGTT
CAGAAGATGA CTGCACAAAA AACGGGAATA TTAGAGAGTA TTACAAAATT CCAAACGGAA
GCACAAGTTA TTGAGAAGGA GATCTCAGAA GATATACGCT CCGCATCAAA GTTAAAAGCG
AGAATTGAGG AGCAAAAGAC AAAAATAGCT GATTTTCAGA AAGAATACAA CCAACTCAAA
AAACTTCACG AATCCTCAAG GGAAGCTGTG AGCAATGCAG AGAAGGAAGT GGCAGTGAGA
GTATCCTCAG TAGATGAAAG TCGAGAGGAA ATCACAAGAC AAGAAAGGCT TTTAAAGGAA
AAGCTTGCGA GTTCTAAATT TGGGGACTAT GAGCAATTTT TGAGAATGAA AAAAACCCAG
CAGGAAATTG ATATTCTCCA GCAAGAGATA ACTATGTATT ACCGAAGCTT AAATTCACTC
AAGGATTTGT ATCGGCACCT GGAGGAGGAA ACAAAGGGGC TTGAAAAACA GGATATTTTG
CTACTAAACA CCCGTTATGC AGAGCTTGAG CAAAGGCAGC AGGTGCTTCA GGAACAGCAT
AATTTAGTGT TCTCCAGATA TAACAATAAC TCAAGAACAA TAAAGCAGCT GACTGGTACC
ATGGAAAAAT TAAAACAGCT GGAGTGCAAA TACGGTATAA TTGCGAAGCT GGCTAAAGTT
GCAAAAGGAG ATAATCCTCA GAGGATAACC TTTGAGAGAT ATGTGCTGGC AGCTTACTTT
GACGAGATTA TAATTGCCGC AAACTACAGG TTAACCAGAA TGACCGGCTC AAGATACCTT
TTAAAGCGAA AAGAGGAAAA AGGCAAGGGT AGAGCCCAGC AGGGACTGGA ATTAGAGGTT
TTCGACAACT ATACGGGAAA GGCCCGTCAT GTAAAAACCC TTTCGGGAGG AGAGGGTTTT
AAGGCTTCAC TCGCTTTGGC TCTTGGTCTG GCTGACGTGG TACAGTCCTA TTCCGGGGGA
ATAAGCCTTG ATACCTTGTT TGTGGATGAG GGTTTTGGGT CCCTTGACCC GGAATCCCTT
GACGGTGCTA TAGAATGCCT AACTGAAATC CAAAAAACAG GTCGTTTGGT AGGAGTAATA
TCACATGTAA CTGAAATAAA AGAGAGAATA AATTCAGTAT TAGAAGTAAT CTCAAGCAAA
GAAGGAAGCT TTATAAAATT TAATATATAG
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| Protein sequence | MKPLKLTISA FGPYAGKQFI DFTTLTEQIF VISGPTGAGK TTIFDAISFA LFGEASGSSR
DRDSLRSDFA EPDTETFVEL EFELKGKIYK IRRMPQQQQR KLRGEGYTLR NADAELLMPN
GTLITKIVNV DERINQLLGI DKSQFKQIVM LPQGEFRKLL ESDSSDREVI FRKIFGTEDF
AEIQKRIDDD RASLEKSVHD LKTQINTHIS HFDVGEDQTL VDMRNSKNIN LEQFIYSVER
LLQKDKSIID EIKAELTETI KAQGMLKEEI TKCTEVNRKL SDREQTKQQY EALLSKGNEY
SQKEKNLEYA RKALPISEVD EQCRKVKQTL EVKAGELELA RQELEKRTCE FKSIAESLNT
YKDLEPENKK NETELALLEK MLPKVIEYEK GLKHLNAARA EYTQLTGEFE RIQRELETNK
IKESQQAETL KLIYTTEAEC ISLEKQISEN RKLLIELDGI RKLMGICQEE QNSLENKRAE
FASFEKNFCD FRSRLEVMED NYIRGQAGIL AGTLKENTPC PVCGAYDHPK PAEMPSSIPS
QEQIRDSKAE FSKLTELRTE KSKAISELNG SVESKYKEII IRLKALDDII KIDNYAELVG
SGRFETVLGQ INATGTGLKE KTVELKAQYN SKKEFTGKKD AYEKEQTQIR DKVKIQEESV
QKMTAQKTGI LESITKFQTE AQVIEKEISE DIRSASKLKA RIEEQKTKIA DFQKEYNQLK
KLHESSREAV SNAEKEVAVR VSSVDESREE ITRQERLLKE KLASSKFGDY EQFLRMKKTQ
QEIDILQQEI TMYYRSLNSL KDLYRHLEEE TKGLEKQDIL LLNTRYAELE QRQQVLQEQH
NLVFSRYNNN SRTIKQLTGT MEKLKQLECK YGIIAKLAKV AKGDNPQRIT FERYVLAAYF
DEIIIAANYR LTRMTGSRYL LKRKEEKGKG RAQQGLELEV FDNYTGKARH VKTLSGGEGF
KASLALALGL ADVVQSYSGG ISLDTLFVDE GFGSLDPESL DGAIECLTEI QKTGRLVGVI
SHVTEIKERI NSVLEVISSK EGSFIKFNI
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