Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0028 |
Symbol | |
ID | 7308949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 28447 |
End bp | 30024 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643606956 |
Product | protein of unknown function DUF342 |
Protein accession | YP_002504396 |
Protein GI | 220927487 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTAA ATATCGCTAT CTATTCTTCT CCGTACATTA GCATAACGCA GCGGGATGAT GGGTATTACA TACAGTCCTT TAAAAAAGGA TTGAGTATAG ATGAGTTTCA AAAAATTCTT AATTCACATC CCGAAATCAA AGTGACAAAT TTCACAACAA TAAAAAATGC ACTTGTACTG GCACCACAAG ACCCCAGAAG ATTTGCCAGT GCAAAAGAAA GAATAAGCAT TGAAGTATCC GGAGATGAAT TGAGGGCTTT TGTGACCGTT AATGTAGGGC AACCAGAAGT TTTAGGGACA GAAATAGTAA AAGAGGTAGT TCTTGAACTA AACCGTAGAG GTGTTGTCTA TGGTATTAAA AAGGACGTGC TCTTAAATTT GGTTGCCGGA AAAACGGTAC TAATAGCTGA GGGTGAACCT CCTCAGAATG GTGTCAATTC CCAGAACAGA TTATATCAAA TAAAAGAAGC TAAACCGGAA ATTAAAGAAG ACGGTACTGC GGATCACTAT GACCTTAACC TTATAAACAT GGTATCTGCG GGAGAGTGGC TAGGTGAAAA AATCCATGCT ACTCCGGGAA AAGAGGGAAA AACCGTATAC GGTAATCCCA TAAAACCTCT ACCCGGTAAG GACTATCCGA TTTTTTTTGA TCGTAAAACA GTAAAAGCAG TAGAGGAAGA GGGCAAGACA ACTCTATACG CTACGAGGAA TGGAGCAGTT TACTTTGCAG GTGATAGCAT AAGTGTATCC AATCATTTAG AAATTGATGA AAATGTAGGA GTTAAAACCG GGAACGTTGA TTTTGACGGC TACTTAACCG TTAAAGGAAC AATTGAGGAT AACTATACTG TCACTACTAC AAAAGATATC GAAGTACTAA GTGACTACGG TGTGGGAAGT TGTAAAGAAA TAAGCAGTCG AGAGGGTAGT ATTTACATAA GGGGCGGTAT AGCCGGTAAA GGTAAAACTG TTATAAAATG CAAAAAAAAT CTATATCTGA AATTTGTTGC TGATGCAGAA ATAATTTGTG ATGGAAGCGT ACATGTAGGA TTTTACTGCC TAAACAGCAA TATTATAGCC AAGGAAGTCA TTTTGGAATC GCTGAAGGGT CAGATAATAG GCGGAAATAT AACAGCAGAT ATAAGGGTGC TTGCAGCTAC ATACGGTACT CCAAGCGAGA AAAGAACTAA CATTTGTGTA AAAGGGTTTG ATAGAATTGC TCTTAAAGAT TCACTTGAAC AACTGGTACA GGAAATAGAT CAACTCAAAA CTTCCATGAA TCAATATAAA CAACAAATTT CTATTTTTAA CATATCAGAT GCCGTAAAAT CAAGGAAAAG CGAGTATGAA AAGCTTAATG AAAATTACAA CAATATAAGA GCTGAGTTGC AGGTAAAGGA GGAGTTAAGA AAGAATATAG CAGGCTATCT TAAAGTCAAG GGAGAAGGAG AAATTTCAAT TCTTAAAAAG GCTTTTCCAA ATACCTTTTT TGAAATTAAG CGAATCCAGA AGGAAATTCA GACACCTATA CTTAGAACAA GCTTTTACTA TAGCGAAGGC ACGATAAAAG AACTATAA
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Protein sequence | MSVNIAIYSS PYISITQRDD GYYIQSFKKG LSIDEFQKIL NSHPEIKVTN FTTIKNALVL APQDPRRFAS AKERISIEVS GDELRAFVTV NVGQPEVLGT EIVKEVVLEL NRRGVVYGIK KDVLLNLVAG KTVLIAEGEP PQNGVNSQNR LYQIKEAKPE IKEDGTADHY DLNLINMVSA GEWLGEKIHA TPGKEGKTVY GNPIKPLPGK DYPIFFDRKT VKAVEEEGKT TLYATRNGAV YFAGDSISVS NHLEIDENVG VKTGNVDFDG YLTVKGTIED NYTVTTTKDI EVLSDYGVGS CKEISSREGS IYIRGGIAGK GKTVIKCKKN LYLKFVADAE IICDGSVHVG FYCLNSNIIA KEVILESLKG QIIGGNITAD IRVLAATYGT PSEKRTNICV KGFDRIALKD SLEQLVQEID QLKTSMNQYK QQISIFNISD AVKSRKSEYE KLNENYNNIR AELQVKEELR KNIAGYLKVK GEGEISILKK AFPNTFFEIK RIQKEIQTPI LRTSFYYSEG TIKEL
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