Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_0023 |
Symbol | |
ID | 7308945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 23752 |
End bp | 24438 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643606951 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002504391 |
Protein GI | 220927482 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGTA AATTATCAAA AATTAATTTA AATGATTATA AACCATTAAG GGAAGTTATT TTTAATTCAT TAAGAGAGGC TATTATAATA GGGGAATTAC GCCCGGGAGA GAGACTTATG GAGGTTCAGC TTGCAGAAAA AATGGGTGTC AGCAGAACAC CTGTCAGAGA AGCTATAAGA AAGCTTGAAC TGGAAGGGCT TGTTGATATG ATCCCAAGGA AGGGTGCCCA TGTTGCAGAG CTTTCCATCA AGGACATAAT GGATGTTCTT GAGGTTAGAG CGTCGTTGGA TGGTTTGGCC ACTTCCCTGG CTGCCGAAAG AATTACTGAT GATGAGCTAA AAGAATTAAA ACATATAAAC TCACAGTTTG CTAACTATAT CGAAAAAGAA AATCTCAACG GCTCCATTAA GAAGGATGCA GAGTTTCATG ATATTATTTA CAGAGCATCA AGAAACGATA AGCTGATCTC TATAATAAAC AATTTAAGGG AGCAGGTTCA GAGATTCAGG GTTATATATC TTAAAGATTA TAATAATTCA AAGAACCTTA TAAAAGAACA CAATGACATA TACGAGGCTG TTAGTTCAAG GTCAATGGAA AATGCCAGAA ATATAGCGAA AACACATATC ATTAATCAGG AATCTACAAT TCTTTCTTCT TTGAAAATGC AAAAAGGGAA TAGTTGA
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Protein sequence | MAGKLSKINL NDYKPLREVI FNSLREAIII GELRPGERLM EVQLAEKMGV SRTPVREAIR KLELEGLVDM IPRKGAHVAE LSIKDIMDVL EVRASLDGLA TSLAAERITD DELKELKHIN SQFANYIEKE NLNGSIKKDA EFHDIIYRAS RNDKLISIIN NLREQVQRFR VIYLKDYNNS KNLIKEHNDI YEAVSSRSME NARNIAKTHI INQESTILSS LKMQKGNS
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