Gene Ccel_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0004 
Symbol 
ID7308927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2955 
End bp4073 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content32% 
IMG OID643606930 
ProductDNA replication and repair protein RecF 
Protein accessionYP_002504372 
Protein GI220927463 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.370076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGTCA AAAACCTGGT TTTAGAGAAT TATAGAAACC ATACAAATAC AAGAATCTTA 
TTTTCTGATC GTTTTAATAT TTTTTATGGT GATAATGGCC AAGGTAAAAC AAATATCCTT
GAAGCCATTT ATTTATGTGC GTCCGGGAGA TCTCACAGGA CATCAAGGGA CTCAGAATTA
ATAAAATTCG GTTGTGAAAA CTTTAGTATT GCGGTTCATG TATCAAAAAC CGGTGGTTTG
GATAAGGATA TTGAGATTAG TTATTATGAA AATCAAAAGA AGCAAATCAA GATAAATGAT
ATTCCTATAA AAAAAATAGG TGCACTTATG GGAAATCTTT ATGCTGTTTT GTTTTCCCCA
GAAGATTTAT TTATAGTAAA ACAGGGACCT ACTGAAAGAA GAAGGTTTGT TGATATTACA
CTCAGTCAGA TAAAACCATC CTATTTTTAT AATCTTCAAC AAATGTCAAA GATTCTTAAA
CAACGAAATA CATTACTCAA GAATATCAGC AGTAATCCCA AACTGATGGA TACTGTTGAT
ATATGGAATA TGAGGTTAGC CGAAGTTGCA GCAGCTATTA TTAAAGCAAG AAGAACTTTT
TCAATAATGC TGTCTGGAAT GGCTGAAAAT CAGCATAATT TTCTTACTGG TAAGAGTGAG
AAAATTTCCT TTGATTATAG GTGTAGTTTT CAAATTTCAG GGCAGGATGA TACAGAACAA
ATTGAAAAAC TCTATCTGGT ACAGCTTGAA AAAAGTATGC AGCGGGATAT AGTCCTTGGA
TATACTACTG TAGGTCCTCA TAGAGATGAT TATGATATTA TGATTAACGA TAAGAGCCTG
AAATTATATG GTTCTCAGGG ACAACAAAGA TCCGCAGTTC TGTCATTGAA AATTGCCGAA
ATTGAGTTAG TAAAAAAGGC GACAAACCAA TATCCTGTCC TACTTTTAGA TGATGTTATG
TCTGAATTGG ATAAGAATAG GCAAAAATAT TTAATGGACA GCATTAAGGA AGTTCAAACA
TTTATTACTT GTACAAATAA AGAGCATTTT GGAAATTTAT TATCAGCAAA CAGTAATTTT
TTTAAAATAG TTGGCGGAAA TATTCATAGT TGCATGTAA
 
Protein sequence
MIVKNLVLEN YRNHTNTRIL FSDRFNIFYG DNGQGKTNIL EAIYLCASGR SHRTSRDSEL 
IKFGCENFSI AVHVSKTGGL DKDIEISYYE NQKKQIKIND IPIKKIGALM GNLYAVLFSP
EDLFIVKQGP TERRRFVDIT LSQIKPSYFY NLQQMSKILK QRNTLLKNIS SNPKLMDTVD
IWNMRLAEVA AAIIKARRTF SIMLSGMAEN QHNFLTGKSE KISFDYRCSF QISGQDDTEQ
IEKLYLVQLE KSMQRDIVLG YTTVGPHRDD YDIMINDKSL KLYGSQGQQR SAVLSLKIAE
IELVKKATNQ YPVLLLDDVM SELDKNRQKY LMDSIKEVQT FITCTNKEHF GNLLSANSNF
FKIVGGNIHS CM