Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_7583 |
Symbol | |
ID | 7307964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 7693326 |
End bp | 7694216 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643605137 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_002502622 |
Protein GI | 220927320 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00673582 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTG CACTGCCCGT GCTCGCCAAC GAGGGGGGCC TGTCCCGCTA TCTCGACGAG ATCCGCCGGT TTCCGATGCT GGAGCCGACG GAGGAATACA TGCTCGCCAA GAGCTGGCGC GAGCACGGAG ACCGCGAGGC AGCCCATAAG CTCGTCACAT CCCATCTGCG CCTTGTCGCC AAGATCGCCA TGGGCTATCG CGGCTACGGC CTGCCGATCG GCGAGGTCGT GTCCGAAGGC AATGTCGGCC TGATGCAGGC CGTCAAGCGC TTCGATCCCG ACAAGGGCTT CCGCCTCGCC ACCTACGCGA TGTGGTGGAT CAAGGCGGCG ATTCAAGAAT ACATCCTGCG CTCGTGGTCG CTCGTGAAGA TGGGCACCAC CGCGAACCAG AAGAAGCTGT TCTTCAACCT GCGCAAGGCG AAGGGCCGCA TCTCGGCCCT CGACGAGGGC GACCTGCGCC CCGAGCAGGT CAAGCAGATC GCGACCCGGC TCGGCGTGCC CGAGCAGGAC GTGATCGACA TGAACCGGCG CCTCTCCGGC GACGCCTCGC TCAACGCCCC CTTACGCGAG GAGGGCGAGG GCGAGTGGCA GGACTGGCTG GTGGACGACA GCCCGAGCCA GGAGGCCGTA CTCGCCCGCG AGGAGGAGGG GCAGAACCGC CTCGCGGCGT TGCGCGACGC GCTGAGCGTG CTCAACCCGC GCGAGCGGCG CATCTTCGAG GCGCGCCGGC TCGCCGAGGA GCCGATCACC CTGGAGGATC TGTCGACCGA GTTCGGCGTC TCCCGCGAGC GGGTGCGGCA GATCGAGGTG CGCGCCTTCG AGAAGGTGCA GGACGCCGTC AAGCGCAACC TCGCGAGCCG CGAGACCGCC CGCGCGGGCG TGCCCGCCTG A
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Protein sequence | MAAALPVLAN EGGLSRYLDE IRRFPMLEPT EEYMLAKSWR EHGDREAAHK LVTSHLRLVA KIAMGYRGYG LPIGEVVSEG NVGLMQAVKR FDPDKGFRLA TYAMWWIKAA IQEYILRSWS LVKMGTTANQ KKLFFNLRKA KGRISALDEG DLRPEQVKQI ATRLGVPEQD VIDMNRRLSG DASLNAPLRE EGEGEWQDWL VDDSPSQEAV LAREEEGQNR LAALRDALSV LNPRERRIFE ARRLAEEPIT LEDLSTEFGV SRERVRQIEV RAFEKVQDAV KRNLASRETA RAGVPA
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