| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7185 |
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| Symbol | |
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| ID | 7304727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 7269975 |
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| End bp | 7273547 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643604739 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002502228 |
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| Protein GI | 220926926 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.202363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG CCAATCCCAA GCCGCCGGTC GCCCGGTTCG CGCTCCCCAA ATCCGCCGCC
CTCACCCGGG CCGTCGAGGC GCTTCGACGC GGCGACAGCC CCACCCTCGC CCGGGTGCCG
GACGGGTTCG ACGCCCTGGT GGTGGCCGAC CTTGCCCGGG CGCTCGGCCA GACGGCGCAG
GGCCCGGCGG TGCTGGTCCA CGTCGCCCGC GACGGCACCC GCTCGGCGGC CTTCGCGAGC
GCGCTCGCCT TCGTGGCGCC CGAGATCGAG GTGCTGAGCG TCCCCGCCTG GGACTGCCAG
CCCTACGACC GGGTCTCTCC GAACCCGGCC ATCGCCGCGG AGCGCATGAC GGCCCTGTCG
CGGCTCGCCC GCTCGCGCTC GTCCGAGGAG CGGCCGCGCA TCGTCGCCAC CACGGTCAAC
GCGCTCGTGC AGCGGGTGCC CGCGCGCGAC CGCATCGCGG TCGAGACCTT CTCGGCTGCG
GTCGGCAACG CGCTCGACAC CGACAAGATC GTGGCGTGGC TCGAAGCCAA CGGCTTCCTG
CGCACCGGCA CCGTGCGCGA CACCGGCGAA TACGCCGTGC GGGGCGGCAT CATCGACCTC
TCGCCGCCCG GCCTGCCGAA CCCGGTGCGC CTCGATTTCT TCGGCGACAC GCTCGAATCC
ATCCGCAGCT TCGATCCCGA GACCCAGCGC ACCATCGGGC AGCTGCGCTC CCTCGACCTC
GTGCCGATGA GCGAGGTGCA GCTCACCACC GAGAGCATCC GCCGCTTCCG CCAGGGCTAC
GTCTCGACCT TCGGGGCCGC CACCCGCGAC GACCGGCTCT ACGAGGCGGT GAGCGAGGGG
CGCCGCGCGG CCGGGATCGA GCACTGGCTG CCGCTCTTCG CCGACCGGCT CGATACCCTG
TTCGACTATC TTGCGGGCGT GCCCCTGATC TTCGACCGGG ACGTGGACGA CGCGGCGGGC
GAGCGGCTCG GCCAGGTCCA GGACTACTAC GACGCCCGTT GCGAGGGCTT ACGGACGCCG
CAGCCCGGCG TCGCCCCCTA CAAGCCGCTC AAGCCCGATG CGCTCTACCT CTCGCCGGCC
GAGTGGGCGA AGCGGGTCGA GGGCGCGACG GTCGCGCGCC TCACCCCCTT CGCGGTGCCG
GAGGCCGCGG GGCGCAGCGT GATCGACTGC GAGGCCGTGC CCGCCCGCAG CTTCGCGCCC
GAGCGGGCGC AGGAGGGCGT CAACGTCTTC GACGCGGCGA TCCAGCACCT CCGCGACCTG
CAGGGCACCG GCCACCACGT GATCCTGGCG GCGTGGTCCG AGGGCTCCCG CGACCGGCTC
TGCGGCGTGC TCGCCGACCA CGGCCTCGGC AAGCCGAAGA CCATCACGCG GTTCTCCGAT
GTCCTGGCGC TCAAGCGCGG GCAGGACGTG GCGGTGGCGG TCTGGGGCCT CGAATCCGGC
TTCACCATCG AGCGCCTCGC GGTGATCGCC GAGACCGACA TCCTGGGCGA CCGCCTCGTG
CGGCCCACGC GCAAGGTCAA GCGGCCCCAG GACGTGATCC TGGAGGTGCA GGCGCTCGAG
GCCGGCGACC TCGTCGTGCA TGCCGACCAC GGCATCGGCC GCTTCACCGG CCTCAAGACC
GTGACGGCGG CGGGCGCGCC GCATGACTGC CTGGAGATCC AGTACAGCGG CGGCCTGCTG
CTCCTGCCGG TCGAGAACAT CGAGCTCCTC ACCCGCTACG GCTCGGAGGA GGCCGATGTC
CCTCTCGACA AGCTCGGTGG TGGGGCGTGG CAGGCCCGCA AGGCGAAGCT CAAGCGGCGC
ATCCTCGAGA TGGCGGGCGC CCTCATCAAG GTCGCGGCCG AGCGCTTCCT CAGGTCCGCG
CCCAGGATGG AGCCGCCGGA GGGCACCTAT GGCGAGTTCG CGGCCCGCTT CCCCTACGAG
GAGACCGAGG ACCAGGAGGC GGCCATCGCC GCGACGCTGG GCGACCTCAC GGCCGGGCGG
CCGATGGACC GGCTGATCTG CGGCGATGTC GGCTTCGGCA AGACCGAGGT GGCGCTGCGC
GCCGCCTTCG TCACGGCGAT CTCGGGCAAG CAGGTGGCCG TGGTGGTGCC GACGACACTG
CTCGCCCGCC AGCACTACCG CACTTTCGCG GAGCGCTTCA AAGCGCTGCC GGTCAACATC
GCGCAGGCCT CCCGCTTCGT GTCGAATACC GAGCTGAAGA AGGTCCGGGA GGGCTTGGCC
AACGGCACGG TCGACATCGT GGTCGGCACC CACGCGCTGC TGGCCAAGAC TGTCGCCTTC
AGGGATCTCG GCCTCATCAT CATCGACGAG GAGCAGCATT TCGGCGTCGC CCACAAGGAG
CGGCTGAAGG CGCTGCGCTC CGAGGTGCAC GTGCTGACGC TCTCGGCGAC GCCGATCCCG
CGCACCCTGC AGCTCGCCAT GACGGGCGTG CGCGAATTGT CGATCATCGC CACGCCCCCG
GTGGACCGGC TGGCGGTGCG CACCTTCGTG ACGCCCTTCG ACCCGCTGCT GATCCGCGAG
GCGCTGCTGC GCGAGCGCTA CCGGGGGGGC CAGGCCTTCT ACGTGGTGCC CCGCATCGAC
CATCTCGACG AGGTCAAGCG CTTCCTCGAC CGGGAGATGC CGGAGGCCAA GGTCGGCATC
GCGCACGGGC AGATGGCGGC GGGCCAGCTC GAGGACGTGA TGACGGCCTT CTACGAGGGC
AGGTTCGACA TCCTGCTCTC GACCACGATC GTGGAATCGG GCCTCGACAT CCCGACCGCC
AACACCCTGA TCGTGCACCG GGCCGACATG TTCGGGCTCG CCCAGCTCTA CCAGCTGCGC
GGGCGCGTCG GCCGCTCGAA GGCGCGCGCC TACGCGCTGT TCACGACGCC GGAGAACAAG
ACGCTCACGG TCCAGGCCGA GCGGCGCCTC AAGGTGCTGC AATCCCTCGA CACGCTGGGG
GCGGGCTTCC AGCTCGCGAG CCACGACCTC GACATCCGCG GCGCCGGCAA CCTGCTCGGC
GAGGAGCAGT CCGGCCACAT CAAGGAGGTC GGCTACGAGC TCTACCAGCA GATGCTGGAG
GATGCGGTCG CGGCCCTCAA GGCCGGCCAG GAGGTGCCCG CCGACGAGCA ATGGTCGCCC
ACCATCGCGC TCGGCGCGCC CGTCACCATG CCGGAGGACT ACGTCTCCGA TCTCTCGGTG
CGGCTCGGCC TCTACCGGCG CCTCGCGACG CTGGAGAACG ACGCGGAGCT CGAGAGCTTC
GGGGCCGAGC TCATCGACCG CTTCGGCCCC CTGCCCCCCG AGGTGGAGCA GCTCCTCAAG
ATCGTGACCA TCAAGATCCT GTGCCGGGAG ACGAATGTCG AGAAGGTCGA GGCCGGGCCG
AAGGGCATCG TGATGCATTT TCGCGATCGC GCCTTCGCCA ATCCGGCCAA GCTCGCCGCC
TACATCGCCG AGCAGCGCTC CTTCGCCAAG GTGCGCCCCG ACATGAGCGT GGTCTTCATC
CGCGACCTCG GCACGGTGGC CGAGCGGCTG AAGGAGACCA CCGCGATCCT GCGCGACCTC
GCCAAGCTCG CCACGCGCAA GAAGGCGGCC TGA
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| Protein sequence | MAKANPKPPV ARFALPKSAA LTRAVEALRR GDSPTLARVP DGFDALVVAD LARALGQTAQ
GPAVLVHVAR DGTRSAAFAS ALAFVAPEIE VLSVPAWDCQ PYDRVSPNPA IAAERMTALS
RLARSRSSEE RPRIVATTVN ALVQRVPARD RIAVETFSAA VGNALDTDKI VAWLEANGFL
RTGTVRDTGE YAVRGGIIDL SPPGLPNPVR LDFFGDTLES IRSFDPETQR TIGQLRSLDL
VPMSEVQLTT ESIRRFRQGY VSTFGAATRD DRLYEAVSEG RRAAGIEHWL PLFADRLDTL
FDYLAGVPLI FDRDVDDAAG ERLGQVQDYY DARCEGLRTP QPGVAPYKPL KPDALYLSPA
EWAKRVEGAT VARLTPFAVP EAAGRSVIDC EAVPARSFAP ERAQEGVNVF DAAIQHLRDL
QGTGHHVILA AWSEGSRDRL CGVLADHGLG KPKTITRFSD VLALKRGQDV AVAVWGLESG
FTIERLAVIA ETDILGDRLV RPTRKVKRPQ DVILEVQALE AGDLVVHADH GIGRFTGLKT
VTAAGAPHDC LEIQYSGGLL LLPVENIELL TRYGSEEADV PLDKLGGGAW QARKAKLKRR
ILEMAGALIK VAAERFLRSA PRMEPPEGTY GEFAARFPYE ETEDQEAAIA ATLGDLTAGR
PMDRLICGDV GFGKTEVALR AAFVTAISGK QVAVVVPTTL LARQHYRTFA ERFKALPVNI
AQASRFVSNT ELKKVREGLA NGTVDIVVGT HALLAKTVAF RDLGLIIIDE EQHFGVAHKE
RLKALRSEVH VLTLSATPIP RTLQLAMTGV RELSIIATPP VDRLAVRTFV TPFDPLLIRE
ALLRERYRGG QAFYVVPRID HLDEVKRFLD REMPEAKVGI AHGQMAAGQL EDVMTAFYEG
RFDILLSTTI VESGLDIPTA NTLIVHRADM FGLAQLYQLR GRVGRSKARA YALFTTPENK
TLTVQAERRL KVLQSLDTLG AGFQLASHDL DIRGAGNLLG EEQSGHIKEV GYELYQQMLE
DAVAALKAGQ EVPADEQWSP TIALGAPVTM PEDYVSDLSV RLGLYRRLAT LENDAELESF
GAELIDRFGP LPPEVEQLLK IVTIKILCRE TNVEKVEAGP KGIVMHFRDR AFANPAKLAA
YIAEQRSFAK VRPDMSVVFI RDLGTVAERL KETTAILRDL AKLATRKKAA
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