Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_6915 |
Symbol | |
ID | 7301644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 6999154 |
End bp | 7002342 |
Gene Length | 3189 bp |
Protein Length | 1062 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643604470 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_002501963 |
Protein GI | 220926661 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.35459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCCG CCATCTTCGT CGACCGGCCA CGCCTCGCGG TGGTGATCGC CATCGTCACG GCGATCGCCG GGGCTCTGGC GCTGCTCTCC ATCCCGGTGG CGCAGTATCC CGACATCGTG CCGCCGCAGG TCTCCGTAAC GACGACCTAT CCGGGCGCGT CCGCCGACGT CGTGGAATCG ACCGTGGCCC AGCCGATCGA GTCCCAGGTC GTCGGCGTCG ACAAGATGAT CTACATGAAG AGCGTGAGCG GCAACGACGG CAGCTACACG CTCACCGGCT CCTTCGAGCT CGGCACCGAT CCCGACATCA ACGCCGTCAA CGTCAACAAC CGGGTCCAGA TCGCCCTCGC CAAGCTGCCC GAGGACGTCC GCAAGCAGGG CGTCACGGTC AAGAAGAAAT CCTCGGCCCT GCTCGGCGTG CTCGCCGTCT ACTCGCCGAA GGCGATCCAG GATCCGCTCT TCATCTCCAA CTACGTGACC ATCAATCTGC TCGACCGGAT CAAGAGCACG CCGGGCGTCG GCGACGCGAC GCTGTGGGGG CCGCAGGATT ACGCCATGCG GGCCTGGGTG CGCACGGATC AGCTCACCGG CCTCAACCTG ACCACAGGCG ACGTCATCAA CGCCATCAAG GCCCAGAACG TGCAGGCGCC CGTGGGGCGG ATCGGCGCCC GCCCGATCTC CGACGAGCAG CAGCTCCAGC TCAGCATCCA AACCCAGGGG CGGCTGACCT CGCCCGAGCA GTTCCAGAAC ATCGTGCTGC GCACGAACCC GGACGGATCC CTGCTGCGCC TCGGCGACGT GGCCCGGATC GAGCTCGGCG CGGCGAGCCT CGACCGCGAG ACGCGGCTCA ACGGCAGCCC GGCGACGGTC ATCGCCATCT ACCAGTCGCC CGGCGCGAAC GCCATCGCGA CCCTGAAGGA GGTCAAGGCC CGGGTCGGCG AGCTCGCCAA GGCCTTCCCG GAGGGGCTGG AGTGGAAGGT CACCTACGAT CCCACCGCCT TCATCACCGA GACGGTGCAC GAGGTGCAGA AGACCCTCGT CGAGGCCTTC GTGCTCGTCG TCATCGTGGT GTTCCTGTTC CTGGGCAGCC TGCGGGCGAC GCTGATCCCG ACGCTCGCCG TCCCGGTGAG CCTGATCGGC ACCTTCATCG CCCTCAAGGC CGTGGGCTAC TCGGCGAATT CCGTCTCGCT GCTCGCCATG GTGCTGGCGA TCGGCATCGT GGTCGACGAC GCCATCGTGG TGGTCGAGAA CGTCGAGCGG GTGATGGAGG AGCACCCGGA CCTCACGCCG CGCGAGGCGA CGAAGCGTGC CATGGCGGAG ATCACCGCGC CCATCATCGC GATCACGCTC GTCCTGCTCT CCGTGTTCGT GCCGGTCGCC TTCGTGCCCG GCATCTCGGG CGAGCTCTTC CGCCAGTTCG CGGTCGCGGT GGCGGTCTCG ATGTTTTTGT CGGCCATCAA CGCGCTGACC CTCTCGCCCG CCCTCTGCGG CGTGCTGCTG CGGCCCCATC ACGGCCCCCG CCGGGGCATC ATGGGGCTGG TGATGCGCGG GATCGACAAG GTGCGCGACG GCTACGGGGC CGCCGTCGCC CGGATCGTGC GGCTGTCGGT CATCGGCCTC GTCCTGGCGC TCGCGGCCGC CTGGGGCACG GTCGAACTCT CGAAGATCAC CCCGACCGGC TTCCTGCCGG AGGACGACCA GGGCGCCTTC TTCGTCGTGG TGCAGTTGCC CGAGGGCGCC GCGGTCGGGC GGACCTCGGA GGTCGTGGGC CGGGCCGAGG CCCTCCTGCG CGAGGAGCAC GCGGTGGCCG ACTACACCTC GGTGATCGGC CTCAACTTCA TCGACAACTA CTCGCAGAGC AACGCGGCCT TCATGGTGGT GACGCTCAAG CCGTTCGAGG AGCGCAAGGG CGCGGGCGAC GGGGCGGCGG CGATGATCGC GCGCCTCGGC CAGCGCTTCC GGGAGATCCA GGGCGGGATG GTCGTCCCCC TGGCGCCCCC GCCGATCATC GGCCTCGGCA CCGGCGGTGG CTTCGCCTAT GTGCTGGAGG ACCTGCGCGG CGGTGATCCG CGGGAGCTCG CCCAGGCCCT GCGCGGCCTC ATCGTCGCGG CGAACCAGGA GCCGCGGCTC AACCGGGTGT TCAGCACCTT CTCGGCGACG AACCCCTCGG TCTTCCTCGA CATCGACCGC AACAAGGTCC AGATCCTCGG CGTGTCGCTC GATTCCGTGT TCCAGGCGCT GCAGGCCTCG CTCGGCGGCT ACTACGTCAA CGACATCAAC CTGTTCGGCC GCACCTGGCA GGTCCAGGTG CAGGCCGAGG CCGCCGACCG GGCGAGGATC GACGACATCT ACCGCATCAA CGTGCGCAAC AAGGACGGCC AGATGGTGCC CCTGCGCAGC CTCGCGGAAG TCAGGATCGT GGTCGGGCCG CCCTCGCTCA TCCGCTACAA CAACCTGCGC GCGGTGACGG TGCAGGGCTC GCCCGCCCCG GGCGTCTCGT CGGGCCAAGC GCTCGCCGCC ATGCAGGCGG TCGCGGCCCG CACCTTGCCG ACCGGGTTCG GCGGGGAATG GACCGACACC GCCTTCCAGG AGAAGCGGGC GGAGGGCAAG ACCGCGATCA TCCTGGCCTT CGCGGTGCTG TTCGCCTTCC TGTTCCTCGT CGGCCTCTAC GAGAGCTGGA CGATCCCGGT GCCGGTGCTG CTCTCGGTCA CGGTGGGCAT CGTGGGCGCC TACGCGGCCA TGGTCTGGGG CAAGCTGACC CTCGACCTCT ACGCCCAGAT CGGCATGGTG GTGCTGATCG GGCTTGCGGC CAAGAACGGC ATCCTCATCG TCGAGTTCGC CAAGGAGCAG CGGGAGAAGG GCGTGGGCTT GCGGGAGGCG GCGACCGAGG GTGCGCGGCT GCGCTTCCGC CCGGTGATGA TGACCTCCTT CGCCTTCATC CTCGGCCTGC TGCCCCTGGT GGTCGCCACC GGCGCCTCCC AGCTCGCCCG GCGCGACGTG GGCACGCCGG TCTTCGGCGG CATGATCGCC GCCTCCTTCC TCGGCATCTT CGTGATCCCG CCGCTCTACG TCGTGTTCCA GGGCCTGCGC GAGCGGGCCT GGCGGCTCAT GGGCGGCAAG GGGAAGCAGC GACCGATGCC GCCGCCCGGC GCGCCCGCGG GGGCGCCGGG GCATCTTCCG GCCGAGTGA
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Protein sequence | MLSAIFVDRP RLAVVIAIVT AIAGALALLS IPVAQYPDIV PPQVSVTTTY PGASADVVES TVAQPIESQV VGVDKMIYMK SVSGNDGSYT LTGSFELGTD PDINAVNVNN RVQIALAKLP EDVRKQGVTV KKKSSALLGV LAVYSPKAIQ DPLFISNYVT INLLDRIKST PGVGDATLWG PQDYAMRAWV RTDQLTGLNL TTGDVINAIK AQNVQAPVGR IGARPISDEQ QLQLSIQTQG RLTSPEQFQN IVLRTNPDGS LLRLGDVARI ELGAASLDRE TRLNGSPATV IAIYQSPGAN AIATLKEVKA RVGELAKAFP EGLEWKVTYD PTAFITETVH EVQKTLVEAF VLVVIVVFLF LGSLRATLIP TLAVPVSLIG TFIALKAVGY SANSVSLLAM VLAIGIVVDD AIVVVENVER VMEEHPDLTP REATKRAMAE ITAPIIAITL VLLSVFVPVA FVPGISGELF RQFAVAVAVS MFLSAINALT LSPALCGVLL RPHHGPRRGI MGLVMRGIDK VRDGYGAAVA RIVRLSVIGL VLALAAAWGT VELSKITPTG FLPEDDQGAF FVVVQLPEGA AVGRTSEVVG RAEALLREEH AVADYTSVIG LNFIDNYSQS NAAFMVVTLK PFEERKGAGD GAAAMIARLG QRFREIQGGM VVPLAPPPII GLGTGGGFAY VLEDLRGGDP RELAQALRGL IVAANQEPRL NRVFSTFSAT NPSVFLDIDR NKVQILGVSL DSVFQALQAS LGGYYVNDIN LFGRTWQVQV QAEAADRARI DDIYRINVRN KDGQMVPLRS LAEVRIVVGP PSLIRYNNLR AVTVQGSPAP GVSSGQALAA MQAVAARTLP TGFGGEWTDT AFQEKRAEGK TAIILAFAVL FAFLFLVGLY ESWTIPVPVL LSVTVGIVGA YAAMVWGKLT LDLYAQIGMV VLIGLAAKNG ILIVEFAKEQ REKGVGLREA ATEGARLRFR PVMMTSFAFI LGLLPLVVAT GASQLARRDV GTPVFGGMIA ASFLGIFVIP PLYVVFQGLR ERAWRLMGGK GKQRPMPPPG APAGAPGHLP AE
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