Gene Mnod_6915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6915 
Symbol 
ID7301644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6999154 
End bp7002342 
Gene Length3189 bp 
Protein Length1062 aa 
Translation table11 
GC content69% 
IMG OID643604470 
Producttransporter, hydrophobe/amphiphile efflux-1 (HAE1) family 
Protein accessionYP_002501963 
Protein GI220926661 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.35459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCCG CCATCTTCGT CGACCGGCCA CGCCTCGCGG TGGTGATCGC CATCGTCACG 
GCGATCGCCG GGGCTCTGGC GCTGCTCTCC ATCCCGGTGG CGCAGTATCC CGACATCGTG
CCGCCGCAGG TCTCCGTAAC GACGACCTAT CCGGGCGCGT CCGCCGACGT CGTGGAATCG
ACCGTGGCCC AGCCGATCGA GTCCCAGGTC GTCGGCGTCG ACAAGATGAT CTACATGAAG
AGCGTGAGCG GCAACGACGG CAGCTACACG CTCACCGGCT CCTTCGAGCT CGGCACCGAT
CCCGACATCA ACGCCGTCAA CGTCAACAAC CGGGTCCAGA TCGCCCTCGC CAAGCTGCCC
GAGGACGTCC GCAAGCAGGG CGTCACGGTC AAGAAGAAAT CCTCGGCCCT GCTCGGCGTG
CTCGCCGTCT ACTCGCCGAA GGCGATCCAG GATCCGCTCT TCATCTCCAA CTACGTGACC
ATCAATCTGC TCGACCGGAT CAAGAGCACG CCGGGCGTCG GCGACGCGAC GCTGTGGGGG
CCGCAGGATT ACGCCATGCG GGCCTGGGTG CGCACGGATC AGCTCACCGG CCTCAACCTG
ACCACAGGCG ACGTCATCAA CGCCATCAAG GCCCAGAACG TGCAGGCGCC CGTGGGGCGG
ATCGGCGCCC GCCCGATCTC CGACGAGCAG CAGCTCCAGC TCAGCATCCA AACCCAGGGG
CGGCTGACCT CGCCCGAGCA GTTCCAGAAC ATCGTGCTGC GCACGAACCC GGACGGATCC
CTGCTGCGCC TCGGCGACGT GGCCCGGATC GAGCTCGGCG CGGCGAGCCT CGACCGCGAG
ACGCGGCTCA ACGGCAGCCC GGCGACGGTC ATCGCCATCT ACCAGTCGCC CGGCGCGAAC
GCCATCGCGA CCCTGAAGGA GGTCAAGGCC CGGGTCGGCG AGCTCGCCAA GGCCTTCCCG
GAGGGGCTGG AGTGGAAGGT CACCTACGAT CCCACCGCCT TCATCACCGA GACGGTGCAC
GAGGTGCAGA AGACCCTCGT CGAGGCCTTC GTGCTCGTCG TCATCGTGGT GTTCCTGTTC
CTGGGCAGCC TGCGGGCGAC GCTGATCCCG ACGCTCGCCG TCCCGGTGAG CCTGATCGGC
ACCTTCATCG CCCTCAAGGC CGTGGGCTAC TCGGCGAATT CCGTCTCGCT GCTCGCCATG
GTGCTGGCGA TCGGCATCGT GGTCGACGAC GCCATCGTGG TGGTCGAGAA CGTCGAGCGG
GTGATGGAGG AGCACCCGGA CCTCACGCCG CGCGAGGCGA CGAAGCGTGC CATGGCGGAG
ATCACCGCGC CCATCATCGC GATCACGCTC GTCCTGCTCT CCGTGTTCGT GCCGGTCGCC
TTCGTGCCCG GCATCTCGGG CGAGCTCTTC CGCCAGTTCG CGGTCGCGGT GGCGGTCTCG
ATGTTTTTGT CGGCCATCAA CGCGCTGACC CTCTCGCCCG CCCTCTGCGG CGTGCTGCTG
CGGCCCCATC ACGGCCCCCG CCGGGGCATC ATGGGGCTGG TGATGCGCGG GATCGACAAG
GTGCGCGACG GCTACGGGGC CGCCGTCGCC CGGATCGTGC GGCTGTCGGT CATCGGCCTC
GTCCTGGCGC TCGCGGCCGC CTGGGGCACG GTCGAACTCT CGAAGATCAC CCCGACCGGC
TTCCTGCCGG AGGACGACCA GGGCGCCTTC TTCGTCGTGG TGCAGTTGCC CGAGGGCGCC
GCGGTCGGGC GGACCTCGGA GGTCGTGGGC CGGGCCGAGG CCCTCCTGCG CGAGGAGCAC
GCGGTGGCCG ACTACACCTC GGTGATCGGC CTCAACTTCA TCGACAACTA CTCGCAGAGC
AACGCGGCCT TCATGGTGGT GACGCTCAAG CCGTTCGAGG AGCGCAAGGG CGCGGGCGAC
GGGGCGGCGG CGATGATCGC GCGCCTCGGC CAGCGCTTCC GGGAGATCCA GGGCGGGATG
GTCGTCCCCC TGGCGCCCCC GCCGATCATC GGCCTCGGCA CCGGCGGTGG CTTCGCCTAT
GTGCTGGAGG ACCTGCGCGG CGGTGATCCG CGGGAGCTCG CCCAGGCCCT GCGCGGCCTC
ATCGTCGCGG CGAACCAGGA GCCGCGGCTC AACCGGGTGT TCAGCACCTT CTCGGCGACG
AACCCCTCGG TCTTCCTCGA CATCGACCGC AACAAGGTCC AGATCCTCGG CGTGTCGCTC
GATTCCGTGT TCCAGGCGCT GCAGGCCTCG CTCGGCGGCT ACTACGTCAA CGACATCAAC
CTGTTCGGCC GCACCTGGCA GGTCCAGGTG CAGGCCGAGG CCGCCGACCG GGCGAGGATC
GACGACATCT ACCGCATCAA CGTGCGCAAC AAGGACGGCC AGATGGTGCC CCTGCGCAGC
CTCGCGGAAG TCAGGATCGT GGTCGGGCCG CCCTCGCTCA TCCGCTACAA CAACCTGCGC
GCGGTGACGG TGCAGGGCTC GCCCGCCCCG GGCGTCTCGT CGGGCCAAGC GCTCGCCGCC
ATGCAGGCGG TCGCGGCCCG CACCTTGCCG ACCGGGTTCG GCGGGGAATG GACCGACACC
GCCTTCCAGG AGAAGCGGGC GGAGGGCAAG ACCGCGATCA TCCTGGCCTT CGCGGTGCTG
TTCGCCTTCC TGTTCCTCGT CGGCCTCTAC GAGAGCTGGA CGATCCCGGT GCCGGTGCTG
CTCTCGGTCA CGGTGGGCAT CGTGGGCGCC TACGCGGCCA TGGTCTGGGG CAAGCTGACC
CTCGACCTCT ACGCCCAGAT CGGCATGGTG GTGCTGATCG GGCTTGCGGC CAAGAACGGC
ATCCTCATCG TCGAGTTCGC CAAGGAGCAG CGGGAGAAGG GCGTGGGCTT GCGGGAGGCG
GCGACCGAGG GTGCGCGGCT GCGCTTCCGC CCGGTGATGA TGACCTCCTT CGCCTTCATC
CTCGGCCTGC TGCCCCTGGT GGTCGCCACC GGCGCCTCCC AGCTCGCCCG GCGCGACGTG
GGCACGCCGG TCTTCGGCGG CATGATCGCC GCCTCCTTCC TCGGCATCTT CGTGATCCCG
CCGCTCTACG TCGTGTTCCA GGGCCTGCGC GAGCGGGCCT GGCGGCTCAT GGGCGGCAAG
GGGAAGCAGC GACCGATGCC GCCGCCCGGC GCGCCCGCGG GGGCGCCGGG GCATCTTCCG
GCCGAGTGA
 
Protein sequence
MLSAIFVDRP RLAVVIAIVT AIAGALALLS IPVAQYPDIV PPQVSVTTTY PGASADVVES 
TVAQPIESQV VGVDKMIYMK SVSGNDGSYT LTGSFELGTD PDINAVNVNN RVQIALAKLP
EDVRKQGVTV KKKSSALLGV LAVYSPKAIQ DPLFISNYVT INLLDRIKST PGVGDATLWG
PQDYAMRAWV RTDQLTGLNL TTGDVINAIK AQNVQAPVGR IGARPISDEQ QLQLSIQTQG
RLTSPEQFQN IVLRTNPDGS LLRLGDVARI ELGAASLDRE TRLNGSPATV IAIYQSPGAN
AIATLKEVKA RVGELAKAFP EGLEWKVTYD PTAFITETVH EVQKTLVEAF VLVVIVVFLF
LGSLRATLIP TLAVPVSLIG TFIALKAVGY SANSVSLLAM VLAIGIVVDD AIVVVENVER
VMEEHPDLTP REATKRAMAE ITAPIIAITL VLLSVFVPVA FVPGISGELF RQFAVAVAVS
MFLSAINALT LSPALCGVLL RPHHGPRRGI MGLVMRGIDK VRDGYGAAVA RIVRLSVIGL
VLALAAAWGT VELSKITPTG FLPEDDQGAF FVVVQLPEGA AVGRTSEVVG RAEALLREEH
AVADYTSVIG LNFIDNYSQS NAAFMVVTLK PFEERKGAGD GAAAMIARLG QRFREIQGGM
VVPLAPPPII GLGTGGGFAY VLEDLRGGDP RELAQALRGL IVAANQEPRL NRVFSTFSAT
NPSVFLDIDR NKVQILGVSL DSVFQALQAS LGGYYVNDIN LFGRTWQVQV QAEAADRARI
DDIYRINVRN KDGQMVPLRS LAEVRIVVGP PSLIRYNNLR AVTVQGSPAP GVSSGQALAA
MQAVAARTLP TGFGGEWTDT AFQEKRAEGK TAIILAFAVL FAFLFLVGLY ESWTIPVPVL
LSVTVGIVGA YAAMVWGKLT LDLYAQIGMV VLIGLAAKNG ILIVEFAKEQ REKGVGLREA
ATEGARLRFR PVMMTSFAFI LGLLPLVVAT GASQLARRDV GTPVFGGMIA ASFLGIFVIP
PLYVVFQGLR ERAWRLMGGK GKQRPMPPPG APAGAPGHLP AE