| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6903 |
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| Symbol | |
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| ID | 7301632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 6986020 |
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| End bp | 6987897 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643604458 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002501951 |
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| Protein GI | 220926649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGG CGGCCGACCT GCCGGGCCGG GCTCACGCGG CGCCGGCCAC CCCGTCCGAC
TGGCTCGCCG TCGCCGAGCG CTGGCTCCGG CTCGCCGTCG AGATCCCGGC CGCCCTCCTG
GTCGCCGCCG AGGTGCTGAT CCTGTTCGCC GGCATCGGCG CGCGGGCGCT CGGCCATCCG
ATCATCTGGA GCGACGAGCT CGCCTCGATC CTGTTCCTGT GGCTCGCCAT GCTCGGCAGC
GTGGTGGCGA TCCAGCGCGG CGAGCACATG CGGCTCACCT TCGTGGTCGG CTCCCTGTCG
CCGCGGGCGC AGGCGTGGTG CGAGGCGCTC GCGGTCGGGG CGGTGTTCGC CTTCCTCGTC
CTGCTGCTGC ACGCGGCCTA CGACTACACG GACGACCAGT CCTTCGTGGA GACGCCGGCC
CTCGGCTGGC CGGGGACGAT CCGGGCGCTC GCGGTGCCGG TCGGGTTCGT GGCGGCGCTG
CTGAGCTCCT CCTTGCGTCT CGCCCGCCAC GGCATCGCCG ATCTCCTCGG TGTCGGGCTG
GTTCTAGGCG GGCTCGCCGC GCTCCTCGCC CTCGGCGCGC CGGCCCTGAC CGGGATGGGC
AACTGGTCCC TCGTCGTCTT CTTCGTCGGG CTCCTGGGCG TCGGCATCGT GGCGGGCGTG
CCGATCGCGT TCTCCTTCGC GCTCGCCACC TCGGCCTACC TGCTCACCGT GACCTCGACG
CCGCTGACCA TCGTGGTCGG CCGCATGGAC GAGGGCATGA GCAGCCTGAT CCTGCTCGCC
ATCCCGCTCT TCGTGCTCCT CGGCCAGCTC GTCGAGGTGA CCGGGATGGC GCGGGTGATG
GTCGCGTTCC TGGCCTCGCT GCTCGGCCAC GTGAAGGCGG GCATGTCCTA CGTGCTCCTC
GGCGCGATGC TGCTCGTCTC CGGCATCTCC GGCTCGAAGA CCGCGGACAT GGCCGCGGTC
GCCCCGGTGC TGTTTCCCGA GATGCGCCGC CGCGGCATGA AGGACGGCGA GTTGCTGTCG
CTGCTCGCCG CCTCGGGCGC CATGAGCGAG ACGATCCCGC CCTCGATCGT CCTCATCGCC
ATTGCGTCGG TCACGGGGGT GTCGATCGCG GCGCTGTTCA CGGCCGGGAT CCTGCCCGCG
CTCGTGCTGG CTGTGGTGCT CGCCGCCGTC GCCCGCTACC GCGCGGGCAG GGAGGAGGAT
GCCGTCACGG TGGCGCGGGC CCCGGCTTCC GTGGTCGGGA AGACGCTCGT GGTTGCGCTC
CCGGCGCTGC TGCTGCCGTT CCTGATCCGC ACCGCGGTGG TGGAGGGCGT CGCCACGGCG
ACGGAGGTCT CCACCATCGG CATCGCCTAC GCGCTGCTCC TCGGGCTCCT CGTCTACCGC
GGCGGTCTGC GGGCGAGGGC GGTGCTGCCG ATGCTGGCGC GCACGGCCTC GCTGTCGGGG
GCGATCCTCT TCATCGTCGG CGCGGCGAGC GCCATGGCCT GGGCGCTGAC GCAGTCCGGC
TTCTCGCACG ACCTCGCCCG GGCGATGGCC GCCGTCCCGG GCGGGCAGGT CGGCTTCCTG
CTGATCTCGG TCGTCGCCTT CATGGTGCTC GGAAGCCTGC TGGAGGGCAT CCCGGCCATC
GTGCTCTTCG GACCCCTGCT GTTCCCGATC GCCCATCAGT TCGGCATCCA CGAGGTGCAC
TACAGCATGG TGGTGATCCT CGCGATGGGC CTCGGCCTGT TCGCGCCGCC ATTCGGCCTC
TGCTACTACG CGGCCTGCAT CATCGGGCAG GTGTCGCCCG AATCCGGAAT GCGTCGGATC
TGGATCTATC TCGGCGCGCT GTTCCTCGGG CTGCTCGTGC TGACCTTCGT GCCCTGGTTC
TCGACCGGGT TCCTCTGA
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| Protein sequence | MSAAADLPGR AHAAPATPSD WLAVAERWLR LAVEIPAALL VAAEVLILFA GIGARALGHP
IIWSDELASI LFLWLAMLGS VVAIQRGEHM RLTFVVGSLS PRAQAWCEAL AVGAVFAFLV
LLLHAAYDYT DDQSFVETPA LGWPGTIRAL AVPVGFVAAL LSSSLRLARH GIADLLGVGL
VLGGLAALLA LGAPALTGMG NWSLVVFFVG LLGVGIVAGV PIAFSFALAT SAYLLTVTST
PLTIVVGRMD EGMSSLILLA IPLFVLLGQL VEVTGMARVM VAFLASLLGH VKAGMSYVLL
GAMLLVSGIS GSKTADMAAV APVLFPEMRR RGMKDGELLS LLAASGAMSE TIPPSIVLIA
IASVTGVSIA ALFTAGILPA LVLAVVLAAV ARYRAGREED AVTVARAPAS VVGKTLVVAL
PALLLPFLIR TAVVEGVATA TEVSTIGIAY ALLLGLLVYR GGLRARAVLP MLARTASLSG
AILFIVGAAS AMAWALTQSG FSHDLARAMA AVPGGQVGFL LISVVAFMVL GSLLEGIPAI
VLFGPLLFPI AHQFGIHEVH YSMVVILAMG LGLFAPPFGL CYYAACIIGQ VSPESGMRRI
WIYLGALFLG LLVLTFVPWF STGFL
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