| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6698 |
|---|
| Symbol | |
|---|
| ID | 7306712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 6784002 |
|---|
| End bp | 6784742 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643604262 |
|---|
| Product | porin |
|---|
| Protein accession | YP_002501762 |
|---|
| Protein GI | 220926460 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAT CGATCCTCCG CCTCGGAGCG CTCGGCTGCG CCTGCCTCGG CCCGGCGGCG
CTGGCCGCCG ACCTGCCCCG GCACGCGGCC CCGCCCCCGC TGCCGGTCCC GCCGGTCTTC
ACCTGGACCG GCTTCTACGC CGGCGTGAAC GCGGGCTACG GGTTCGGCTC GGGCAGCGAC
AGCTTCACCG ATCCGACCTA CGGCACGATC TCGACGGGCG GCGGCCGCGA CGGCTTCGTC
GGTGGTGGTC AGGTCGGTTA CAATTACCAG TTCACGCCCG GATCGGGCTT CGTGGTCGGC
GCGGAAGCCG ACATCCAGGG CACCACCTTC GGACGCAGCC GCACCGGGCT CGTCGGCTCC
GCGCCCTTCT ACGACGTCGG CCCGAGCCTC GACTGGTTCG GCACGGTGAG GGGCCGGATC
GGCTACGCGG TGGACCGGAT CCTGGTCTAC GGCACGGGCG GCTTCGCCTA TGGGGGCGGC
AGCCTGCCGT CCTTCGCCGC GTCCTATACC GGCCCCCTGC CCGGCACGAC CCGCACCGGC
TGGGCCGCGG GCGGCGGCGT CGAATACGCC ATCACCGACC GGCTCAGCGC CCGGCTCGAG
GGCCTGTACG TCAATCTCGA CCGTGGGCAC CGCGACACGA TCTACGACGC CACCGCGGGC
GCCTATTACG GCGTCGCCCC GGACAGCTCC GCCTTCGGCC TCGTCCGGGC CGGCCTGAAC
TACCGGTTCT CGACGTTCTG A
|
|---|
| Protein sequence | MMRSILRLGA LGCACLGPAA LAADLPRHAA PPPLPVPPVF TWTGFYAGVN AGYGFGSGSD
SFTDPTYGTI STGGGRDGFV GGGQVGYNYQ FTPGSGFVVG AEADIQGTTF GRSRTGLVGS
APFYDVGPSL DWFGTVRGRI GYAVDRILVY GTGGFAYGGG SLPSFAASYT GPLPGTTRTG
WAAGGGVEYA ITDRLSARLE GLYVNLDRGH RDTIYDATAG AYYGVAPDSS AFGLVRAGLN
YRFSTF
|
|---|
| |