Gene Mnod_6605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6605 
Symbol 
ID7308445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6698667 
End bp6700262 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content77% 
IMG OID643604175 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_002501676 
Protein GI220926374 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0079449 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGG CCGGGGGCCG TCGACAGGCG GCGCCCCGGC CGGCCTTCCG CGGGGCGGGG 
CATGCGGCTA GCCTCGCGGG CATGTCCGCT TCGCCTCTTC CTGCGTCCCT CGCCGTCGCC
GCGCCGGCCA ACGCGCCCGA ATGGTCGGTC ACGGAGCTCG CCGCGGCGCT CAAGCGCACG
CTCGAGGACG CGTTCGGGCA TGTGCGGCTG CGGGGCGAGA TCTCGGGCTA TCGCGGCCCG
CACAGCTCGG GCCACGCCTA TTTCTCGCTC AAGGACGGCG GCGCCAAGAT CGACGCGGTG
ATCTGGAAGG GCACGCTTGC CCGGCTGCGC CACCGCCCGA AGGAGGGACT GGAGGTCGTC
GCCACCGGGC GGATCACCAC CTTCCCGGGC AAGTCCGCCT ATCAGATCAT CATCGAGGCG
CTGGAGCCCG CGGGCGCCGG CGCCTGGATG GCGCTCCTGG AGGAGCGCCG CCGGCTTCTC
GCCGCCGAGG GCCTGTTCGA CGCCGCCCGC AAGCGCCCGC TTCCCTACCT GCCGCGGGTG
GTGGGCGTCG TCACCTCGCC GACCGGCGCG GTGATCCGCG ACATCCTCCA CCGGCTGGAG
GACCGCTTCC CGCGCCCCGT CCTGGTCTGG CCCGTGCGGG TACAGGGGGA GGGCTCGGCC
GAGGAGGTGG CGGCGGCAAT CCGGGGCTTC AGCGCGCTCG CTCCCGACGG CCCGATCCCG
CGGCCGGACG TGCTGATCGT CGCCCGCGGC GGCGGCTCGA TCGAGGATCT GTGGAGCTTC
AACGAGGAGA TCGTGGTCCG GGCCGCGGCC GAGAGCGCGA TCCCGCTGAT CTCCGCGGTC
GGCCACGAGA CCGACGTGAC GCTGATCGAC CACGCCGCCG ACCGCCGCGC CCCGACCCCG
ACCGGCGCCG CCGAGATGGC GGTGCCGGTG CGCCTCGACC TCCTGGCGGA TCTCGACGGT
CTGGCGCGGC GCCACGCGGC GGCGCTGGCG CGATCCATCG AGCGGCGGCG CAGCGACCTC
AGGGGGCTCG CGCGCGTCAT CCCGAGCCCG GAGGCGCTGC TCGCGGTCAA GCGCCAGCGC
CTCGACCTCG CGGAGGCGCG GCTGCGCCCG GCGCTGGCCG AGGGCGCGCG GACCGCGCAG
CGGCGCCTCG CGCGCCTGCT CCAGGCCCTT GCCCGCCACC CGCCGGCCCT GCGCCTCGCC
CGCGCCCGCG AGCGCTTTGC GGCCATCGAC CACCGGCCGC GCCACGCGCT GGAACGCCTC
GTCGCGGTGC GGAGCGAGCG CCTGAACGGC CTCGCCCAGC GCCTCGCGCA GGCGCAGGAC
CGCGACCTGG AGCGGCGCCG CAGCCGCTTC GCGGGCGCCG CCGCCCTGTT CGACAGCCTG
AACTACCGGG CGGTGCTGGC GCGCGGCTAT GCCCTCGTCC TCGATGCGGA GGGCCGCCCC
CTGGCCGAGG CCGAGGCCGC GCGCGCCGCC GGCCGCATCA CGGTCGAGTT CCAGGACGGC
AAGGTGGCAG CGGTGGTCGA GGGCGCCCCG CCCCGCCGCG CCGCGGCGAA GCGCGGGCCC
GCGGGGCCGG CCCGGCAGGG CTCGCTGTTC GACTGA
 
Protein sequence
MTRAGGRRQA APRPAFRGAG HAASLAGMSA SPLPASLAVA APANAPEWSV TELAAALKRT 
LEDAFGHVRL RGEISGYRGP HSSGHAYFSL KDGGAKIDAV IWKGTLARLR HRPKEGLEVV
ATGRITTFPG KSAYQIIIEA LEPAGAGAWM ALLEERRRLL AAEGLFDAAR KRPLPYLPRV
VGVVTSPTGA VIRDILHRLE DRFPRPVLVW PVRVQGEGSA EEVAAAIRGF SALAPDGPIP
RPDVLIVARG GGSIEDLWSF NEEIVVRAAA ESAIPLISAV GHETDVTLID HAADRRAPTP
TGAAEMAVPV RLDLLADLDG LARRHAAALA RSIERRRSDL RGLARVIPSP EALLAVKRQR
LDLAEARLRP ALAEGARTAQ RRLARLLQAL ARHPPALRLA RARERFAAID HRPRHALERL
VAVRSERLNG LAQRLAQAQD RDLERRRSRF AGAAALFDSL NYRAVLARGY ALVLDAEGRP
LAEAEAARAA GRITVEFQDG KVAAVVEGAP PRRAAAKRGP AGPARQGSLF D