Gene Mnod_6399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_6399 
Symbol 
ID7305940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6497909 
End bp6499204 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content67% 
IMG OID643603986 
ProductGeneral substrate transporter 
Protein accessionYP_002501487 
Protein GI220926185 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCACA TCGACGCCGA TCCGCCGCCG TCCCGCCTCG GGGACATCCT GCGCGCAACA 
AGCGGCAACT TCCTGGAGAT GTTCGACTTC TTCCTGTTCG GGTTCTACGC CTCGCACATT
GCACAGGCGT TCTTCCCGCC GGTGAACGAA GTCACCGCGC TGCTCTTGAC TTTCACGACC
TTCTGGCTCG GCGCCCTGAT GCGCCCGGTC GGCGCGATCG TGCTCGGCGC CTATATCGAC
CGGATTGGTC GCCGCCGCGG CCTGATCGTC ACCCTGTCGA TCATGGCGCT CGGCACGGTC
CTGATCGCGA TCTGCCCGAC CTACGCGAGC ATCGGCCTCG CGGCCCCCGT TATCGTGCTG
ATCGGCCGTC TGCTGCAGGG CTTCTCAGCC GGCGTCGAGC TCGGCGGTGT CTCGATCTAC
CTGTTCGAGA TCGCGACGCC CGGCAACAAG GGCTTCTACA CGGCCTTCCA GTCGGCCAGC
CAGCAGGTGG CGATCTTCTT CGCCGCGGTG ATTGGCTACC TGATGCATGC CGGCCTGAGC
GGCCAGCAGA TCGCGGACGG CGGCTGGCGG CTTCCCTTCT TCATCGGCTG CCTGATCGTG
CCGCTGATCT TCGTGATCCG GCGCTCGCTC CAGGAGACCC CGGAATTCCT GGCCCGGCGG
GCGCATCCCT CGACTGCCGA GATCTTCCGC TCGGTGGCGG CGAACTGGCC CGTCATCCTG
CTCGGCACGC TGCTCACCGT GCCGACGACG GTGACCTTCT ATCTGATCAC CGTCTACACT
CCGACCTTCG GCAAGGCGGT GCTCCACCTC GGCGAGGGCG AGAGCCTTGC CGTCACCGTC
TGCGTCGCGA TCAGCAACTT CATCTGGCTG CCCATCGGCG GCGCGGTCTC GGACCGGATC
GGCCGTAAGC CCGTCCTGAT CGCGATCGCG ATGCTGGCGC TCGCCACCGC CTACCCGGCG
CTCGCCTGGC TCACAGCGTC GCCGAGCTTT GCCAAGATGC TCGTCGTCGA GCTGTGGTTC
TCGTTCTTCT TCGGCGCCTA CAACGGCGCC CTGGTGGCCG CCCTGTCAGA GATCGTTCCG
GCACATGTGC GGGCGACAAG CTTTTCCCTC GCCTTCAGCC TGGCCGCTGC TCTGTTCGGC
ACGGCCACGC CGATGGTCTC GACCTGGCTG ATCAGCACCT CCGGCGACCG GGCCGCCCCC
GGATACTGGC TCATGCTGGC CGCCGCCTGC GGCCTTGCCG CCACCCTGAC CCTCTACCGC
TCCGGCGCCG CGGCGCGCGT GCCGGCGCAG GCCTGA
 
Protein sequence
MTHIDADPPP SRLGDILRAT SGNFLEMFDF FLFGFYASHI AQAFFPPVNE VTALLLTFTT 
FWLGALMRPV GAIVLGAYID RIGRRRGLIV TLSIMALGTV LIAICPTYAS IGLAAPVIVL
IGRLLQGFSA GVELGGVSIY LFEIATPGNK GFYTAFQSAS QQVAIFFAAV IGYLMHAGLS
GQQIADGGWR LPFFIGCLIV PLIFVIRRSL QETPEFLARR AHPSTAEIFR SVAANWPVIL
LGTLLTVPTT VTFYLITVYT PTFGKAVLHL GEGESLAVTV CVAISNFIWL PIGGAVSDRI
GRKPVLIAIA MLALATAYPA LAWLTASPSF AKMLVVELWF SFFFGAYNGA LVAALSEIVP
AHVRATSFSL AFSLAAALFG TATPMVSTWL ISTSGDRAAP GYWLMLAAAC GLAATLTLYR
SGAAARVPAQ A