| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6165 |
|---|
| Symbol | |
|---|
| ID | 7304886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 6275704 |
|---|
| End bp | 6276441 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643603777 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002501284 |
|---|
| Protein GI | 220925982 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.362427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC CACCGCACAT TCTGATCACG GACGATGATC CTCGAATCCG CCAGATGCTG
TCACGTTATC TTGAGAGCGA GGGCTTTCGG GTCAGCACGG CCGAGAGCGG AACAGCGATG
CGTAAGGCTC TCGCCTCCGA GAAGATCGAT CTTGTCCTGT TGGATCTTGT CCTAGCCGGA
GAGGACGGAC TTGAACTGGC TCGCGAAATC CGTGCGTCCT CTCGGGTCGG CATCATCATG
GTCACAGGCC GATCCGATAT AATCGACATG GTGGTTGGCC TGGAGGTCGG GGCGGACGAC
TACATTGCAA AACCGTTTCA GCTTCGGGAA GTCCTTGCGC GGACGCGGAG TGTTCTCCGA
CGGCTGCAGC CGAGTGCATC GACGGAAACC GCCAAGGCTG TTGGGCCTTC ATCCCGAGCG
GAAGTGATCG GATTTGAAGG TTGGCGCCTC GATATTAGCC GTCGCGAACT GATGTCGCCA
GAGGGTCAGG AGGTTCCTCT TACGACGGGT GAGTTTGACC TGCTCGCCGC GATGGCCAAG
CACCCGGGCC GGGTTCTCAG CCGTGACATG CTGATGGATC TGACACGCGG AAGGGAGTGG
GATGCGCTGG ACCGCTCCAT TGACGCGCAG GTTGTGCGTC TCCGCCGCAA GCTTGAGGCA
GATCCGAAGA ACCCTAAGTT GATTAAATCG GTTCGTGGTG CTGGCTATGT GTTCGCAGGT
CGGATTGAAC GAATGTAG
|
|---|
| Protein sequence | MSEPPHILIT DDDPRIRQML SRYLESEGFR VSTAESGTAM RKALASEKID LVLLDLVLAG
EDGLELAREI RASSRVGIIM VTGRSDIIDM VVGLEVGADD YIAKPFQLRE VLARTRSVLR
RLQPSASTET AKAVGPSSRA EVIGFEGWRL DISRRELMSP EGQEVPLTTG EFDLLAAMAK
HPGRVLSRDM LMDLTRGREW DALDRSIDAQ VVRLRRKLEA DPKNPKLIKS VRGAGYVFAG
RIERM
|
|---|
| |