| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_6056 |
|---|
| Symbol | |
|---|
| ID | 7305550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 6169516 |
|---|
| End bp | 6170310 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643603677 |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_002501184 |
|---|
| Protein GI | 220925882 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00777479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGG GAGATCCCGT CCGCGTCCGC TGGAGCCATG GGCCGGCGGC TCCTCCGCTG
CCGAGCCTCG TCCATCTGCG CCAGGACACG GCCAAACCCC TGTATCAGCA GCTCGAGGAG
CAGCTGCGCG CGCTCATCGA GGACGGCACC CTCGCGGCCG GCACCACCCT GCCGGCGGAA
CGCACCTTCG CGGAGGCGAT GGGGGTGAGC CGCACCACGG TCCAGCGCTG CTACGACGCC
CTGCGCCGGC AGCGCTACCT GAGCGCCCAT GGGCGGCTCG GCTACATCGT CGAGGCCGGC
CGCACCCGGC TCAGTCCCGG CATGGACCGC CTCAAGGGCT TCACCGAGGA GATGCACGAA
CTCGGCCGCG TGCCCTCCTC CGAGATCCTG GAGCGGGTCG TCGTCCGGGA CCCTGCCCTG
GCGGAGCTGT TCGGCCGCCC GCCGCAGGCG ACCTTCCTGC GGCTCGTGCG CATCCGCAAG
GGCGACGGCA TCCCGCTGTC GCGGGAGATG GCGTGGTACG ACCTCACGGC GGTCCCGGAC
CTCGCGGATG CGGACCTGAG CGGGTCGGTC TACGCCCATC TCGGTCGGTC CGGGGCGCGG
CTGGTGCGCT GCCAGCAGAC GATCGAGGCC GCGCTGCCGG ACGCCGATGC CTGCGCGGTG
TTCGGTTTTT CCGAGCCGCG CCCCTGCCTG CTGATCAAGC GGCGCTCCTA TGCCCGCGAC
GACCAGATGA TCGAGTATGT CGAGGGCCTG TTCCGGGGCG ACGCCTATGC GTACCGCCTC
GACCTGAGGG TCTAG
|
|---|
| Protein sequence | MSEGDPVRVR WSHGPAAPPL PSLVHLRQDT AKPLYQQLEE QLRALIEDGT LAAGTTLPAE
RTFAEAMGVS RTTVQRCYDA LRRQRYLSAH GRLGYIVEAG RTRLSPGMDR LKGFTEEMHE
LGRVPSSEIL ERVVVRDPAL AELFGRPPQA TFLRLVRIRK GDGIPLSREM AWYDLTAVPD
LADADLSGSV YAHLGRSGAR LVRCQQTIEA ALPDADACAV FGFSEPRPCL LIKRRSYARD
DQMIEYVEGL FRGDAYAYRL DLRV
|
|---|
| |