Gene Mnod_5944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5944 
Symbol 
ID7306126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp6054140 
End bp6055162 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID643603567 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002501074 
Protein GI220925772 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0162589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTT CCGCCGGCCG TCCCGGGCCG CTCTCCCGCC GCGCCCTTTG CGCCGCCGCC 
ACACTTCTCC TCCTCGGTGG CCCCGCGCTT GCGCAGAGCC CCATCGTCAT CAAGTTCAGC 
CACGTCACCG CGCCGGACAC GCCCAAGGGC CGCGGCGCGG ACAAGTTCAA GGAGCTCGCC 
GAGAAGTACA CGGCCGGGAA GGTCAAGGTC GAAGTCTATC CCAATTCGCA GCTCTTCAAG 
GACAAGGAAG AGGTCGAGGC GCTGCAGCTC GGCGCCGTGC AGATGCTGGC GCCCTCGCTG 
GCGAAGTTCG GGCCGCTCGG CGCGAAGGAG TTCGAGGTCT TCGACCTGCC CTATATCCTG 
CCCGACAAGG CCGCGCTGCG CCGCGTCACC GAGGGGCCGC TCGGCAAACG CCTGTTCGAG 
AAGCTCGAAT CCAAGGGCAT CACCGGCCTC GCCTACTGGG ACAACGGCTT CAAGATCATG 
AGCGCCAACA GGCCGCTGCG CCAGCCGGCG GATTTCCGCG GCCTCAAGAT GCGCATCCAG 
TCCTCGAAGG TGCTGGAGGC CCAGTTCCGG GCGCTCGGCG CGATCCCGCA GGTGATGGCC 
TTCTCGGAAG TCTACCAGGG CATGCAGACG GGCGTCGTCG ACGGCTCCGA GAACACCCCC 
TCGAACATGT TCACCCAGAA GCACCACGAG GTGCAGAAGT TCGCGACCCT CTCCGACCAC 
GGCTACATCG GCTATGCGGT AATCACGAAC AAGAAATTCT GGAACGGCCT GCCCGCGGAA 
GTGCGCGGCC AGCTCGAGAA GGCGATGGCC GAGGCGACGA CCTACGCCAA CGAGATGGCG 
GGCAAGGACA ACGCCGATGC CCTCGAGGAG ATGAAGAAAT CGGGCAAGAT CACCTTCATC 
GAACTCACCC CCGACGAGAA GGCGGCGTGG CACAAGGCCC TGGAGCCGGT CACCGTCGAG 
ATGTCGAAGC GGGTCGGCAA GGACGTGATC GACGAGTTCC AGCGCGAGGC ACGCACGCAG 
TAG
 
Protein sequence
MSRSAGRPGP LSRRALCAAA TLLLLGGPAL AQSPIVIKFS HVTAPDTPKG RGADKFKELA 
EKYTAGKVKV EVYPNSQLFK DKEEVEALQL GAVQMLAPSL AKFGPLGAKE FEVFDLPYIL 
PDKAALRRVT EGPLGKRLFE KLESKGITGL AYWDNGFKIM SANRPLRQPA DFRGLKMRIQ 
SSKVLEAQFR ALGAIPQVMA FSEVYQGMQT GVVDGSENTP SNMFTQKHHE VQKFATLSDH 
GYIGYAVITN KKFWNGLPAE VRGQLEKAMA EATTYANEMA GKDNADALEE MKKSGKITFI 
ELTPDEKAAW HKALEPVTVE MSKRVGKDVI DEFQREARTQ