Gene Mnod_5924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5924 
Symbol 
ID7306106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6039867 
End bp6040586 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID643603548 
ProductOstA family protein 
Protein accessionYP_002501055 
Protein GI220925753 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.657817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCC GCCTCACCGC GGCGCTCGCC GCCGCCCTGC TCCTCGCCGC CCCGGCCGCC 
CTCCACGGCG AGACGGCGCC GCCCAAGAAG GAGCGCAATT CCGGCTTCGG CGCCTTCGGC
AGCTCGGGCA AGGAGCCGAT CAAGATCGAC GCGGACCGCC TCGACGTGTT CGACCACGAG
AACAAGGCGA TCTTCGCCGG CAACGTCGTG GCCGTGCAGG GCGAGAGCAC CATCCGCTGC
TCCAGCATGA CCGTCCACTA CCAGCGCAAC CGCGACAAGG ACGCGAAGGA CGGGGCCAAG
TCGGCGGACA AGCCGGCGGA CGGGAAGGCG CCGGACGCCA AGACGTCGGA TGCGAAGCCG
GCCGACCCGA CCGACAGCGG CGCGATCAAG CAGGTGGTCT GCGCCGGCCC GGTCACGGTG
GTGAACAAGG ACCAGGTGGC GACCGGCGAC AACGCCGTGT TCGACAAGGC TGCGAACCGG
GTGATCCTCA CGGGCAACGT GGTGCTCAGC CAGTGCCAGA ACGTCACCCG CGGCAACCGC
CTCGTCTACG ACATGAATAC CGGCCGGGCG AACATGGACC CGACCGCGGG CGGGCGCGTC
TCGGCGATGT TCGTGCCGGG CGGCAAGGAC GAGGCGAAGC AGGGCAAGCA GGCCGGCTGC
CCGCAGCCGC CCGCACAGGC CGGGAAGCCC GCGCCCAAGC CGCGGGCGCA GGCCAACTGA
 
Protein sequence
MTTRLTAALA AALLLAAPAA LHGETAPPKK ERNSGFGAFG SSGKEPIKID ADRLDVFDHE 
NKAIFAGNVV AVQGESTIRC SSMTVHYQRN RDKDAKDGAK SADKPADGKA PDAKTSDAKP
ADPTDSGAIK QVVCAGPVTV VNKDQVATGD NAVFDKAANR VILTGNVVLS QCQNVTRGNR
LVYDMNTGRA NMDPTAGGRV SAMFVPGGKD EAKQGKQAGC PQPPAQAGKP APKPRAQAN