| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5782 |
|---|
| Symbol | |
|---|
| ID | 7303197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 5885256 |
|---|
| End bp | 5888192 |
|---|
| Gene Length | 2937 bp |
|---|
| Protein Length | 978 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643603399 |
|---|
| Product | P4 family phage/plasmid primase |
|---|
| Protein accession | YP_002500914 |
|---|
| Protein GI | 220925612 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3378] Predicted ATPase |
|---|
| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC CCGCGGTCAA CACCGCCAGC GCGTTCCTAG CGGCGGTCTT CGGCGCCTAC
AGCGAGGCGA ACGTCTTCGT CTGCGCGCTG CCGAACGTGC GCGGCGACCA CGGCGAGCGC
GCGCTGATCA CGCGGGATTT CGTGCTCGCG GACCGGTTCG TCAGGAAGTG GGACCGGCCC
GGCACCGCGA TCTACTATTG CGTGGGGACG ATCCGGCCGG GCGCCCAGCC GCTCCGGCCC
GGCGGATCGG TCCGTTCCCG TGAGAACGTC GCGGAGATCC TGACGCTCGC CAGCGACACC
GACCTGAAGT CGGTCGAGAT CGGCCGCGAA GACATTATCG CCAAATACCA TGCTCTCGAA
TTTCCGCCTT CCGTGATCGT GTGGTCCGGC CGGGGCGCGC AGGGGCTGTG GCTCCTCAAC
GAGGCGCTGC CGGCGACACC CGAGACCATC GCGCGCGTGG AGGCCCTGAA CGCGCAGCTC
GCCGACGTGG TGGCGGGCGA TCCGATCCAG GACGTTTCCC GGCTCCTGCG GCTGCCCGGC
AGCCACAACA CGAAGGAGGG CGGCTGGCGC GATGTCGCGG TGATCCGCGC GCAGTACGAG
CCCCGCTACG CGCTCGAGGA CCTGGAGGAG TGGCTGTCCC GGCAGTCGCC GGTGATGAAG
AAGAAGCCGG CGGAGCCCGC CCCGGGCCGG CCGGCGGTGC CGGGTCTGGC GGACAACCCC
TACCTCGCCG TCGCGGCCCT GTTCGGGATC AAGCCCCCGA TGGACGTCGA GGAGCGTCTG
TCCGCGATGG CCTACCAGGG CGCGGGCGAG ACCTCGATCC ACCAGACGCA GCTCGAAGTG
TCGGCCGCGC TCCTCACCCG CGGCCGGACG ATCGACGAGG CGGTCGCGAT CCTGATGGCG
GCGACGCGCG CGGCGGCCGG CGAGTACGGC GCCCGCTGGA ACTGGGAGCG CGAGGAGCGG
CTCCTGCGCC GCATGTGCGA CGATTGGATC CGCAAGCATC CGGAGGTGCT GGAGCGCCAG
CGCGAGGCCG CCGAGGCGGC TGAAGCTGAC GAGGAAGCCG TCGACGGCGA GGGCGCCGAG
GCCACGGCGG AGGCCGGCCG GGACGGCGCC GGGCCCGCGG ACGCCGCCGC CGCGGCGCGG
CATGCGGAGC GCGGCAGGGC CGAGGCGGCG GCCGGCAAGG GCCGGCAGGC CGGGGCGACG
GTCCACAGCC TCGCGGCCGA GCGGCAGCGG CGCAGCAAGG ACGGGCAGGG CAGGGCGAAG
GAGCCCAAGC CCTCGACGCA CCAGGCGCTG GGCGCGGGCG TCCTGGCGGC CCTGCAGGAG
CGCGGCGAGG CCATCCTGTT CACCAAGAAG ACCGCGTGGC GCTACCGGGA CGGCATCTGG
GCGATGGAGA CGGACGGCCT CTCGTCCTGG CTGAACGTCC AGATCGAGAT GGCCTGCGCG
GCCCTCAACA TCGTCTCGAC GCTCAAGCTC ATCAGCGAAG CGCGAGGCTG GATCCAGCGC
CGGCCCGAGC TGTGGCGCGA CGAGATCCCC TTCGACCGCC ACGGCAAGGT GCCGTGCCGG
TCCGGCCTCG TCGATCCCCG CACGGGCGAG ATCGAGCCGA TCAGGCCGGA GCACTACTGC
ACGTGGGTGG TGGATACCGA GTTCGACCCG GCGGCTCGAT GCCCGCTGTG GCTCCAGATG
CTCGACGACG TGTTCCCCGA CCGGACGGCC ACCGTCCGAA AGGAGATCGT CGCGACGCTG
CAGGAGGTGC TCGGCTGCGC GATGGTCGAC GTGAAATCCC GGCAGCTCAC GAAGGCCCTG
GTGCTCGTGG GCGGCTCGAA CGTCGGCAAG TCGGGCCTGC TCGAAGTCCT GGGCGGGATG
TTCGGAGACG ACCCGATTTC GGTCGCTCTC GACAGCCTGG AAGGCACGCA CGGCAAGATG
CCGTTCGTGC GCCGCGCGCC GTGGGTGCTT CACGAGGCCT TCGATCAGCG CAAGTGGCAC
TTCGCGAGCG GCGTGAAGGC GATCATCACG GGCGATCCCG TCGAGATCAA CGTGAAGAAT
GGCCCCATCA TCAGTGGTCG CGTGCGCGCC CCGATCTTCT GGGGCACGAA CTATCCGCCG
CAGTTCAAGG AGAGCACGCG CGCGATCGTC AACCGGATGA TCGTCATCCA TTGCCGGAAC
GTGTTCGACG ACCACCGGCT GGTCGGCGTG GCGCAGCTCG CGAGCGAGCG CGGCTACGAC
AAGCCTTCCT CGATCGTATT GGCGAAGGAG AGGGCAGGCG TCCTGAACTG GGCCCTTGAA
GGCCTGAGGC GCGCCCTGGA CCGCGGCTCG ATCGCCGTGC CCGCGGAGGT GCGGGAGAAC
GCCGACGCGA TCCACAAGGA TGCCAACATC GTCGCGGGGT TCATCGACGA ATGCATCGAG
TGGGACCACG AGATGCGGGT TCCTGTGCCC GATTTCTGCG CGGCCTTCTC CGTGTGGTGG
GCGGAGAACA AGGGCGAGGA CCGCTCGATT CCCTCGAACG ACAGCATTGG CCGCGCCGTG
ACGGCGCTCG GAAACGAGCG CATCGGTCTT CACGCGAGGG AAACCCGGGA CATGCACCGC
CGCTACCTGT GCGGGATCGC CCTGAACCCG GCCGGCATCG CCTTCTGGAA GCGGGCGCAC
GAGGCCCGTG CATTCGAGGG CAAGACAGCC AGCACGACAC CCGTCGACGA GAATCCGAAC
ACCGCCATTC CCGCCACATG GCGCACACGG GACACGGTGA TCCGAATGAT CGAGGCGCAT
CGCCGAACAG CCCATGACGC TTCGGCGAAG GGAAGTGTCA TGGGCAGACC GGAAGTGTCA
TGCGCCCGAG AAGTGTCATG CGGGGGGAGT GTCATGTCCG AAGCGTCAGG CAAGGCGTCA
TGGGGGCAAG CGTCATCCGT CCAAGCCGTT GATGAATCGA GAGATCCTCA GTTCTGA
|
|---|
| Protein sequence | MADPAVNTAS AFLAAVFGAY SEANVFVCAL PNVRGDHGER ALITRDFVLA DRFVRKWDRP
GTAIYYCVGT IRPGAQPLRP GGSVRSRENV AEILTLASDT DLKSVEIGRE DIIAKYHALE
FPPSVIVWSG RGAQGLWLLN EALPATPETI ARVEALNAQL ADVVAGDPIQ DVSRLLRLPG
SHNTKEGGWR DVAVIRAQYE PRYALEDLEE WLSRQSPVMK KKPAEPAPGR PAVPGLADNP
YLAVAALFGI KPPMDVEERL SAMAYQGAGE TSIHQTQLEV SAALLTRGRT IDEAVAILMA
ATRAAAGEYG ARWNWEREER LLRRMCDDWI RKHPEVLERQ REAAEAAEAD EEAVDGEGAE
ATAEAGRDGA GPADAAAAAR HAERGRAEAA AGKGRQAGAT VHSLAAERQR RSKDGQGRAK
EPKPSTHQAL GAGVLAALQE RGEAILFTKK TAWRYRDGIW AMETDGLSSW LNVQIEMACA
ALNIVSTLKL ISEARGWIQR RPELWRDEIP FDRHGKVPCR SGLVDPRTGE IEPIRPEHYC
TWVVDTEFDP AARCPLWLQM LDDVFPDRTA TVRKEIVATL QEVLGCAMVD VKSRQLTKAL
VLVGGSNVGK SGLLEVLGGM FGDDPISVAL DSLEGTHGKM PFVRRAPWVL HEAFDQRKWH
FASGVKAIIT GDPVEINVKN GPIISGRVRA PIFWGTNYPP QFKESTRAIV NRMIVIHCRN
VFDDHRLVGV AQLASERGYD KPSSIVLAKE RAGVLNWALE GLRRALDRGS IAVPAEVREN
ADAIHKDANI VAGFIDECIE WDHEMRVPVP DFCAAFSVWW AENKGEDRSI PSNDSIGRAV
TALGNERIGL HARETRDMHR RYLCGIALNP AGIAFWKRAH EARAFEGKTA STTPVDENPN
TAIPATWRTR DTVIRMIEAH RRTAHDASAK GSVMGRPEVS CAREVSCGGS VMSEASGKAS
WGQASSVQAV DESRDPQF
|
|---|
| |