Gene Mnod_5694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5694 
Symbol 
ID7302024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5810306 
End bp5811739 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content69% 
IMG OID643603319 
ProductTRAP-type uncharacterized transport system periplasmic component-like protein 
Protein accessionYP_002500834 
Protein GI220925532 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCAG ACGCAAGGTC CACTTCTCCG GCTCCCGAGA CGGCTGTCAC TGTCGTGCCG 
CAGCCCAGGA GATGGGGACG CCTCGCCCTC GTCGTAGTCC TCCTGCTCGG TGTCGCTGCC
GTGTTCGCGG TCGCTCATTT CTGGTCGCCG CACGCCAACC TGCGCATCAC CACGGGCCCG
CCCGGCAGCA CCGCCCACCG CTTCATCACG GCCTTCGTGT CCGTCTCCAA GGTCCAGCAC
CCCCGCGTCA ACCTTGAGCT CGTGCAGGTA AGCGACCTCG CCGGGAGCGC CAAGGCGCTG
GAGGAGGGCC GGACCGACCT CGCCATCGTG CGCAGCGACG CGGCACCGCC CGCCAACGCC
CAGACCATCG TGATCCTGCG CAGGGACGTC GTTGCCTTCG TCCTGCCGCC CCACAGCCAT
GTCAGCTCCA TCGCGAACCT GGCGGGCAAG ACCATCGGCA TTCCGTCCGG GCCGCTGCAG
GCCTCCAATG CCCAGGTCCT CGACACGGTT CTGTCCTACT TCGACGTGCC CGCGAAGGAC
GTCAGCAGGA CCTTCCTGTC GGTCGACGAA CTTGCCAAGG CCGTCCAGCA GAAGAAGCTG
GCGGCGGTCC TCACGGTCGG TCCCATGGCG CCGGGCGAGG TCGTCGACGT GGTCGCCGCG
ATCGCGCGCG CGACGAAGGG GACCCCGGGT ATCCTCGGGC TCGACGAGGC GGAGACCATC
GGCAAGCGCT TCCCCGGCTT CGAGTCGATC GACGTGCCCG CCGGGGCGTT CCGGGCGAGG
CCCGCCACAC CGAGCGACAC CGTCACGACG CTGGCCGTCA CCTATCGGTT CGCCGCGTCG
GAATTGATGC CCAATGTCGT GGCCGCGGCC ATCGCCCGCT CGATCCTGAC CACGAAGGCC
AAGCTCGTGG CCATCACGCC GCTTGCCAAC CAGATCGAGG CGCCCGATCC CGACGACAAG
AGCCCAATCC TGCCCGTCCA CCCGGGCGTC GCAGCCTACC TTAGCAACGG GGACCAGAGC
TTCTTCGACC AGTTCCAGCA ATATTTCTAT GTCGGCGGCC TTGTGGTCAG CCTTGCCGGG
TCGTTCTTCG CGGCCGCGTC GGCCCGCTGG AACCGGCGTC GGTCGGAGGC GGATTGGCGG
CCGATCAAGC GGCTGGTCGA GATTGCCGAC GCGGCGCCGC GCGCCGACGG GACAGAGATC
GCCGCATTGG AGAGCGAGTT CCACCAGCTC GTCTCGGCCG TGCTGGGCCG GTCGCCCGGG
GGCGGCGACA CCGACCGGAT GTCGGCCTTT TCGACGGCCC TGGCGCATGC GCGGCACGCC
CTCGACCAGC GACGGGCAAG CCTCGAGCCG GATACGGGAT CCCGGCCTGC GCCAACGCTC
GTCGTATCGC AGCGGACGCC CCCCGCCTCA GCTGGCCCGG TGCTTCCACC CTAG
 
Protein sequence
MAPDARSTSP APETAVTVVP QPRRWGRLAL VVVLLLGVAA VFAVAHFWSP HANLRITTGP 
PGSTAHRFIT AFVSVSKVQH PRVNLELVQV SDLAGSAKAL EEGRTDLAIV RSDAAPPANA
QTIVILRRDV VAFVLPPHSH VSSIANLAGK TIGIPSGPLQ ASNAQVLDTV LSYFDVPAKD
VSRTFLSVDE LAKAVQQKKL AAVLTVGPMA PGEVVDVVAA IARATKGTPG ILGLDEAETI
GKRFPGFESI DVPAGAFRAR PATPSDTVTT LAVTYRFAAS ELMPNVVAAA IARSILTTKA
KLVAITPLAN QIEAPDPDDK SPILPVHPGV AAYLSNGDQS FFDQFQQYFY VGGLVVSLAG
SFFAAASARW NRRRSEADWR PIKRLVEIAD AAPRADGTEI AALESEFHQL VSAVLGRSPG
GGDTDRMSAF STALAHARHA LDQRRASLEP DTGSRPAPTL VVSQRTPPAS AGPVLPP