Gene Mnod_5501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5501 
Symbol 
ID7305083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5606775 
End bp5608025 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID643603133 
ProductNa+ dependent nucleoside transporter domain protein 
Protein accessionYP_002500648 
Protein GI220925346 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.692361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACA GGATCCTTCA CTTCGTGCTC AGCCTCGCCG TTCTCCTCGG CGTCGCGGTG 
CTGTTCTCCA CCAACTGGCG GGCGATCCGG CCGCGGGTCG TGCTCTCGGC GCTCGCCGTG
CAGGTGCTGC TCGGGGCGGC GGTCCTGTTC GTGCCGGCCG GGCGGCGCAT CCTCGGCGCC
GCCGCGGAGG CGGTCGGCGC GGTGCTGGCC TATGGCGACC GGGGCGCGGC CTTCCTGTTC
GGGGGCCTCG TCGAGCCGAA GATGGTCGAG CTGTTCGGCC ATGGCGGCTT CGTGCTCGCC
TTCCGGGTGC TGCCGCAGAT CGTCTACGTC TCGGCGCTGA TCGGGGTGCT CTACCATCTC
GGCCTCATGC AGGCGCTCGC CCGCGGGATC GGGGCGGCGC TCCGGCGCTT GCTCGGCACC
TCGCGGATCG AGACCTTTTC CGCCGTGATC ACCATCGCCA TCGGTCAGAG CGAGATCGCG
GTCGCTCTGC GCCCCTTCCT GCCGCTGCTC ACGGGGTCCG AGCTCTTCGC CGTGATGTCG
AGCGGCGCGG CCTCCACGGC GGGCTCGATC CTGGCGGGCT ACGCGGCTCT CGGCGTGCCG
ATGGACTATC TCCTCGCCGC CTCCGTGATG GCGATCCCGG GCGGCCTCCT CTACGCCAAG
ATCCTGGTCC CCTCGACGGA GCCGAGCCGG GTCAAGACGA TGCGGGCCGA ATTCGGCGAG
CGGCGTGCGG TCAACCTCAT CGAGGCGGCG GCGGAGGGCA CCCAGAAGGG GCTCGCCGTG
GCGGTGGCGG TCGGTGCCAT GCTGATCGCC TTCGTGGGCC TGATCGCGCT TGCCAACGGC
CTCGTCGCCT GGGGCGGGAG GCTCGTCGGA GCGCCGGACG CCTCCATCGA CGGGCTCCTC
GGCGCCGGCC TCAGCCCGCT CGCCTGGATC CTCGGCGTGC CCTGGGAGCA GGCCGGCACG
GTGGGGGCCG CCATCGGCCA GAAGATCGCC TTCAACGAGT TCCTGGCCTA CGCGAATCTC
TCCCCGGTGC TGAAGAGCGG TGCCCTGGGC GCGCGCACCA CGGCGATCCT CTGCTTCGCG
CTCTGCGGCT TCGCGAATCT CGCCTCGATC GCGATCCAGC TCGCGAGCTT CGGCAGCCTC
GTGCCGGAGC GTCGCTCCGA GGTCGCCGCC TACGGCCTCC GGGCGATCCT GGCGGGCAGC
CTGTCGAACT TCACGAGCGC GGCCGTCGCG GGATTATTCA TTGGTGAATG A
 
Protein sequence
MADRILHFVL SLAVLLGVAV LFSTNWRAIR PRVVLSALAV QVLLGAAVLF VPAGRRILGA 
AAEAVGAVLA YGDRGAAFLF GGLVEPKMVE LFGHGGFVLA FRVLPQIVYV SALIGVLYHL
GLMQALARGI GAALRRLLGT SRIETFSAVI TIAIGQSEIA VALRPFLPLL TGSELFAVMS
SGAASTAGSI LAGYAALGVP MDYLLAASVM AIPGGLLYAK ILVPSTEPSR VKTMRAEFGE
RRAVNLIEAA AEGTQKGLAV AVAVGAMLIA FVGLIALANG LVAWGGRLVG APDASIDGLL
GAGLSPLAWI LGVPWEQAGT VGAAIGQKIA FNEFLAYANL SPVLKSGALG ARTTAILCFA
LCGFANLASI AIQLASFGSL VPERRSEVAA YGLRAILAGS LSNFTSAAVA GLFIGE