Gene Mnod_5476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5476 
Symbol 
ID7306907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5578691 
End bp5581039 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content72% 
IMG OID643603108 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002500623 
Protein GI220925321 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGG CGGATCCCGC CCCACTCGCT GCACGTGCGG CCACGATCCT CGGCATCGCA 
CGAGCCATCA CCCCGGCTCA CCAGCGGTTG GCGCGCGCGG AATCCTGGCT CCGCTTCGCG
ATCCCGGCGA TCCTCGGCCT TTTCCTCATC TCGCTCTTTG CCATCACGGC GACCCAGCTC
CTCGCCCAGC GCCGCGATGC CGTCGCCGAG GCGGGGCGGC AGATCGATCT CCTGGCGCGG
CTCGTCGCGG CGAGCCTGTC GAGCACCGCT CCGGAATCGG AGCTACGCCT CGACGGCGCG
GTCCCGGCCT CCGCCCTGGT GGCGGGGCGC GCGGTCTACC TGATCGGGCC GGACGACCGC
ATCGCCGCCT CCCTGCCCGC CCTCCTCCCT CCGGGGCACA GGCTCGCGGA TCATCTCGGC
GAGGCGCAAC CGCTCCTGAT CCTGGGCGAG CGCGCGGGCG TGATGACCGC CACGCTCGGC
GGCGCGCCCG CCCTGGCGAC CCTGCGCGCC CTGCCGTCCG GCCGGGGCCG GGTCGCGGTG
GTCCAATCCC TCGACACGGC CACCGCCGAC TGGCGGAGCC GCGCCCGCAC CGAGGCGGTG
GTCATCGGCA CCGCCACGCT GGTCATCGTC TGCGTCGGGC TCGCCTATAC GCTCCAGGCG
GACCGGGCCC GCACGGTCGA CCGCGTCTGC GAGCAGGTGC GCCAGCGGCT CGACACGGCG
CTCTGCCGCG GGCGCTGCGG CCTGTGGGAC TGGGACATCG CCCGCGGCCG CATCTACTGG
TCGGACTCGA TGTACCAGCT CCTCGGCTAC GTCCGGGAGC ACGAGTTCCT GTCGTTCGGC
GACGTCAACG CGCTGGTCCA CCCCGACGAC ACCGACCTCT ACGGGCTCGC GAGCCAGCTC
GCCGCCCAGG ACGCCACCGT CGATCACGAA TTCCGCATCC GCAGCGCGGC GGGCGAGTGG
ATCTGGCTCA AGGCCCGGGC GGAGATCGTG CGCGATCAGG ACGATGGCGG GCGCCATCTC
GTCGGGATCA TCATCGACAT CTCCGAGCAG CGCCGCCTCG CGGAATCCAC GGCGACGGCC
GACATGCGCC TGCGCGACGC AGTCGAGGCG GTGTCGGAGG CCTTCGTGCT CTGGGACGCG
CAGAACCGCC TCGTCCTGTG CAACTCGAAG TTCCGGCGGC TTCACGCCCT GACCCTAGAG
GAGGCCCAGC CGGGCCGGCG CTACGACGCG ATCATGGGCC GGGCCGCCGT GCCGGCGGTG
CGCCGCGAGA TTCCCAACAC CGACCTCGCC GAGCTCGGCG CGCGCACCTT CGAGGCCGAA
CTCGCCGACG GGCGCTGGCT TCAGATCAGC GAGCGGCGCA CCAAGGACGG CGGCTACGTC
TCGGTCGGCA CCGACATCAC CACCCTCAAG CGCCACCAGG AGCGCCTCGT CGAGTCCGAG
CGCCAGCTCA TCGCCACCAT CGCCGACCTC AAGCGCTCGC GCCGCACCCT CGAACTCCAG
ACCCAGCAGC TCGCCGACCT CGCCGAGCGC TATCTCGACC AGAAGGCCCA GGCCGAGAGC
GCCAACCGCT CCAAATCCGA GTTCCTGGCC AATATGAGCC ACGAGCTGCG CACTCCGCTG
AACGCGATCC TCGGCTTCGC CGAGGTGATG CAGGACGAGG TCTTCGGGCA GCTCGGCTCG
GAGAAGTACC GGGAATATTG CCGGGACATC CGCTCCAGCG GCCACTATCT GCTGTCGGTC
ATCGACGACA TCCTCGACAT GTCGCGCATC GAGGCGCGCC GGGTGACGCT GGTGAAGCAG
CCCGTGCCGG TGGCGGAGGC CCTGGAACGC GCCCTCAAGC TCATCGCCGA GCCGGCCCGC
GCCAAGGGCC TGACGCTCAG CGTCGAGATG AGCGCCGACG CGGTGGTGCT GGCCGACGAG
CGCGCCCTGC ATCAGATCCT GGTGAACCTG CTCCAGAACG CCGTGAAGTT CACGCCCGAG
GCGGGCCGCG TCGCGGTCCG CACCCGGCGG GCGCTCGACG CCGTCCACAT CTTCGTGGAG
GACAGCGGCA TCGGCATCCC GAAGGCGGTG CTGCCCAAGC TGGGCGCCCC CTTCGAGCAG
GTCGAGAGCA ACTTTTCGCG CAGCTTCAAG GGGTCCGGCC TCGGGCTCGC CATCTCGCGC
TCGCTCACGG AACTGCATGG CGGACGCCTG CGCATCCGCT CGGAGGTGGG ATGCGGCACG
ATCGTCCTCG TGCGCCTGCC CCAGCCGCCG CGGGGCGCGG CCGGCGATCC AGAGGTCGTC
GAGATCGTGC GCGACGCGGC AGCGCCGTCG TCTCGGAAGG TGGCGGCGCC GGAGCCGGCG
GAGGCCTGA
 
Protein sequence
MLEADPAPLA ARAATILGIA RAITPAHQRL ARAESWLRFA IPAILGLFLI SLFAITATQL 
LAQRRDAVAE AGRQIDLLAR LVAASLSSTA PESELRLDGA VPASALVAGR AVYLIGPDDR
IAASLPALLP PGHRLADHLG EAQPLLILGE RAGVMTATLG GAPALATLRA LPSGRGRVAV
VQSLDTATAD WRSRARTEAV VIGTATLVIV CVGLAYTLQA DRARTVDRVC EQVRQRLDTA
LCRGRCGLWD WDIARGRIYW SDSMYQLLGY VREHEFLSFG DVNALVHPDD TDLYGLASQL
AAQDATVDHE FRIRSAAGEW IWLKARAEIV RDQDDGGRHL VGIIIDISEQ RRLAESTATA
DMRLRDAVEA VSEAFVLWDA QNRLVLCNSK FRRLHALTLE EAQPGRRYDA IMGRAAVPAV
RREIPNTDLA ELGARTFEAE LADGRWLQIS ERRTKDGGYV SVGTDITTLK RHQERLVESE
RQLIATIADL KRSRRTLELQ TQQLADLAER YLDQKAQAES ANRSKSEFLA NMSHELRTPL
NAILGFAEVM QDEVFGQLGS EKYREYCRDI RSSGHYLLSV IDDILDMSRI EARRVTLVKQ
PVPVAEALER ALKLIAEPAR AKGLTLSVEM SADAVVLADE RALHQILVNL LQNAVKFTPE
AGRVAVRTRR ALDAVHIFVE DSGIGIPKAV LPKLGAPFEQ VESNFSRSFK GSGLGLAISR
SLTELHGGRL RIRSEVGCGT IVLVRLPQPP RGAAGDPEVV EIVRDAAAPS SRKVAAPEPA
EA