Gene Mnod_5445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5445 
Symbol 
ID7306875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5538161 
End bp5539873 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content74% 
IMG OID643603077 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002500592 
Protein GI220925290 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCGT CCCCCGCCTG GCCCGCCCTG TCCTTCGCCG AGGCGACTGC GCGCCTCACC 
GCCCCGGGCT CGCCCTTCGC GGTGAGCGAG GCGGTGATCC GGGGCGTGCC GACCCGGATC
TGGGCCGCCG CGCCCCCGAC CCTGCGCGAG GTCTTTCTCG CCGGCCGCCG GCACGGCGAG
GCGACCTTCC TCGTCTACGA GGACGACCGC GCGAGCTTCG AGGCCTTCGC GCGCGCCGTG
CTGGCGCTCA GCGCCGACCT GATCCGCGGC GGCCTGCGCC CGGGGGACCG GGTCGCGATC
GCCATGCGCA ACCTGCCGGA ATGGCCGGTC GCGTTCTTCG CGACCCTGCT CGCGGGGGCC
ATCGCCGCGC CGCTCAATGC GTGGTGGACC GGCCCGGAAC TCGAATACGG ACTGATCGAT
TCGGGGGCGA CCGTCGCCAT CCTCGACCCC GAGCGGTTCG ACCGCATCGC CGAGCGGCGC
CAGGCCTGCC CGGCCCTCGC CCGTATCCTC CTCGCCCGCG GCACCGAACC CGGCGCGGAG
AGCCTGGAGG GGATCATCGG GCCCGTCTCC GCCTGGGCCT CCCTGCCGCC CGGAGAGCTG
CCGGAGGTGC CGCTCGCGCC CGAGGACCTC GCGACCCTCT TCTACACCTC CGGGACGACG
GGCCGTTCGA AGGGGGCGAT GGGCACCCAC CGCAACGGAG CCTGCGCGGT GATGGCCCAT
CCGTATTCGG CCGCGCGCGC CGCCCTGCGC CGGGGCGAGC CGGTGCCCGT ACCCGATCCG
CGGGCGCCGC AGAAGGTGAT GCTGGTCTCG GTGCCGTTCT TCCACGTCAC CGGCTGCTTC
GCGACGCTGG TCTCGGCCCT CTCCCGCGGC TCGCGCCTCG TGCTGATGCG GCGCTGGGAG
ATCGCCCGGG CGCTCGACCT GATCGAGCGG GAGCGCTGCA CCAGCGCAGG CGGCGTGCCG
ACCATCGCCT GGCAGCTCCT CGACGGCCGG GAAGCAGGCA CGCACGACCT CTCCTCGCTC
GAAGCCGTGA CCTATGGCGG GGCGCCCGCG CCGGCCGAGC TGGCCCGGCG CCTGCGCGCC
GCCTTCCCGC ACGCGGCCCC GGCCACGGGC TGGGGCATGA CCGAGACCTC CGGCACCTTC
ACCCACCACA TGGGCGAGGA ATACCTGAAC CGGCCCGACA GCTGCGGCCC GCCGCTGCCC
GTCTGCGAGG CGCGGATCGT CGATCCGGAG GGACGCGCGC TGCCGCCCGG CGAGATCGGC
GAGCTGCAGG TGAAGGGCCC CAACGTGGTG GTGGGCTACT GGAACCGCCC CGCCGAGACG
GCGGCGGCCT TCCGGGACGG CTGGCTCGCC ACCGGGGACC TCGCCCGGAT GGACGAGGAA
GGCTTCATCA CCATCGTGGA CCGCGCCCGC GACATGCTGA TCCGCGGCGG CGAGAACATC
TATTGCTGCG AGGTGGAGAA CGCGCTCCAC GAGCACCCGG CGGTGGTGGA CGCCGCCGTG
GTGGCGATCC CGCACCCGAC GCTGGGCGAG GAGCCGGGCG CCGTGGTGGC CCTCGCCCGC
GGGCAGGATA CCTCCGAGGA GGAGCTCAAG GCCTTCGTCG CCGCGCGGCT CGCGGCCTTC
AAGGTGCCGG TGCGCATCCT CTTTTACGAC GAGATCCTGC CGCGCAATCC GAGCGGCAAG
ATCCTCAAGA GCGAGCTGCG GAAGCTGTTC TGA
 
Protein sequence
MMPSPAWPAL SFAEATARLT APGSPFAVSE AVIRGVPTRI WAAAPPTLRE VFLAGRRHGE 
ATFLVYEDDR ASFEAFARAV LALSADLIRG GLRPGDRVAI AMRNLPEWPV AFFATLLAGA
IAAPLNAWWT GPELEYGLID SGATVAILDP ERFDRIAERR QACPALARIL LARGTEPGAE
SLEGIIGPVS AWASLPPGEL PEVPLAPEDL ATLFYTSGTT GRSKGAMGTH RNGACAVMAH
PYSAARAALR RGEPVPVPDP RAPQKVMLVS VPFFHVTGCF ATLVSALSRG SRLVLMRRWE
IARALDLIER ERCTSAGGVP TIAWQLLDGR EAGTHDLSSL EAVTYGGAPA PAELARRLRA
AFPHAAPATG WGMTETSGTF THHMGEEYLN RPDSCGPPLP VCEARIVDPE GRALPPGEIG
ELQVKGPNVV VGYWNRPAET AAAFRDGWLA TGDLARMDEE GFITIVDRAR DMLIRGGENI
YCCEVENALH EHPAVVDAAV VAIPHPTLGE EPGAVVALAR GQDTSEEELK AFVAARLAAF
KVPVRILFYD EILPRNPSGK ILKSELRKLF