Gene Mnod_5410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5410 
Symbol 
ID7301999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5495601 
End bp5496332 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID643603041 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_002500557 
Protein GI220925255 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0341034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTGC ATCTGAGCCG ACTTCGCTTG CGTCGCGACC CCGATGTCGC CGCGCTCGCT 
CACCTCCTTC TACCCAAGAC GGAGGGGGCC CGCGTGGCCG CCGGCCACCG CCTGCTCTGG
TCGCTGTTTG CCGACAGTCC GGACCGCGCC CGCGACTTCC TCTGGTGCGA AGACGCGGGC
GGCACCTGGC AGCGTGCCAC CTTCCTCATC CTGTCGCGGC GCAGACCACA GGACACCCGC
GGCCTCTTCG AGATCGAGAC CAAGCCGTTT GCTCCCGTCC TCGCGCCGGG CCAACGTCTC
GGCTTTCGGC TACGTGCCAG CCCCGCGGCG AGCGACACGC CCACCGCCGT CGGCCGCCGC
GGCAAGCGCA TTGATCCGGT TGCCCGCGCG CTGCGCGACC TGCCGCCGGA GGTGCGAGCG
GAGCGCCGTC ACTCGGTCCT TCAGGAGGTC GGAGCAGGCT GGCTCGCACG ACAAGGCGCG
CGGGCCGGCT TCACTCTTTG CGATGCCGAG GCGCCGAGCG GGACGCGCCA GCCCTGCCTC
AGTGTGGACG GGGAACGCTG GAACGTCTTG CCCCGCGAGG GTGCCGCGCC GGTGCGGTTC
TCAAGCCTCG ATTTCGAAGG CGTGCTGCGC GTCGAAGACC CCTCCCTGTT TCTGGCCGCC
CTCGCTGAGG GGTTCGGCCG CGCCAAAGCA TTTGGGTGCG GCCTGATGTT GATCCGGCCC
AACCGGGGAT GA
 
Protein sequence
MNLHLSRLRL RRDPDVAALA HLLLPKTEGA RVAAGHRLLW SLFADSPDRA RDFLWCEDAG 
GTWQRATFLI LSRRRPQDTR GLFEIETKPF APVLAPGQRL GFRLRASPAA SDTPTAVGRR
GKRIDPVARA LRDLPPEVRA ERRHSVLQEV GAGWLARQGA RAGFTLCDAE APSGTRQPCL
SVDGERWNVL PREGAAPVRF SSLDFEGVLR VEDPSLFLAA LAEGFGRAKA FGCGLMLIRP
NRG