| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_5356 |
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| Symbol | ispG |
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| ID | 7301945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 5433218 |
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| End bp | 5434504 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643602988 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002500504 |
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| Protein GI | 220925202 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00302187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCA TGGAAGCTCC CGCGGCGCCC GAGATCGCCG GCCCCGCGCC CCGGCACGGC
ACCGTCGGTG TGCGGATCGG CGAGGGCGAG GGCGCCGTCA CCATCGGCGG CGGCGCGCCG
ATCGTCGTCC AGTCGATGAC GAACACCGAC ACGGCGGATG TCGATGCCAC GGTGGCGCAG
GTCGCCGCCC TCGCCCGTGC CGGCTCCGAG ATCGTCCGCA TCACGGTCGA CCGGGACGAG
GCCGCGGCTT CCGTGCCGAA GATCCGCGAG CGCCTGGACC GCGTCGGCGT CCACGTGCCG
CTCGTCGGCG ACTTCCACTA TATCGGCCAC AAGCTCCTGT CCGACCATCC GGCCTGCGCC
GAAGCCCTGG CGAAGTACCG CATCAATCCG GGCAATGTCG GCTTCAAGGA GAAGAAGGAT
CTCCAGTTCT CCACCATCGT CGAGATGGCG GCTCGCCACG GCAAGGCGGT GCGCATCGGC
GCCAACTGGG GCTCCCTCGA CGAGGCCCTG CTCACCCGCC TGATGGACGA GAACGCCCGC
AGCGAGCGCC CGCGCGACGC CCGCGCGGTC ATGCGCGAGG CGATGGTGCA GTCCGCCCTC
CTCTCCGCCG ACCGGGCGGT CGAGATCGGC CTGCCCAAGG ACCGCATCGT GCTCTCCGCC
AAAGTCTCGG CGGTGCAGGA CCTGATCGCC GTCTACCGCG AGGTGGCGCG CCGCTCGGAC
TACGCCATCC ATCTCGGCCT CACCGAGGCC GGCATGGGCA CCAAGGGCGT CGTGGCGGCC
TCCGCCGCGA TGGGCGTCCT CCTGCAGGAG GGGATCGGCG ACACGATTCG CTACTCGCTG
ACACCGGAGC CCGGCGGCGA CCGCACCGTG GAGGTGAAGG CCGCCCAGGA GCTGCTCCAG
ACGATGGGCT TCCGCACCTT CGTGCCCCTC GTCGCGGCCT GCCCCGGCTG CGGCCGCACC
ACCTCGACGG TGTTCCAGGA ACTCGCCCGC GACATCCAGA ACTGGATCGC CACCTCGATG
CCGGAATGGC GCAAGACCTA TCCGGGCGTC GAGACCCTCA ACGTCGCGGT GATGGGCTGC
ATCGTGAACG GCCCGGGCGA ATCGAAGCAC GCCGATATCG GCATCTCGTT GCCCGGCACC
GGGGAGAGCC CCTCCGCGCC AGTCTTCATC GATGGCAAGA AGGCGTTGAC GTTGAGGGGG
GCCACCCTCG CCAAGGATTT CGAGGCCATC GTCATCGACT ACATCGAGCG CCGCTTCGGT
CAGGGCCGGC GCAACGCGGC CGAGTAA
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| Protein sequence | MQAMEAPAAP EIAGPAPRHG TVGVRIGEGE GAVTIGGGAP IVVQSMTNTD TADVDATVAQ
VAALARAGSE IVRITVDRDE AAASVPKIRE RLDRVGVHVP LVGDFHYIGH KLLSDHPACA
EALAKYRINP GNVGFKEKKD LQFSTIVEMA ARHGKAVRIG ANWGSLDEAL LTRLMDENAR
SERPRDARAV MREAMVQSAL LSADRAVEIG LPKDRIVLSA KVSAVQDLIA VYREVARRSD
YAIHLGLTEA GMGTKGVVAA SAAMGVLLQE GIGDTIRYSL TPEPGGDRTV EVKAAQELLQ
TMGFRTFVPL VAACPGCGRT TSTVFQELAR DIQNWIATSM PEWRKTYPGV ETLNVAVMGC
IVNGPGESKH ADIGISLPGT GESPSAPVFI DGKKALTLRG ATLAKDFEAI VIDYIERRFG
QGRRNAAE
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