Gene Mnod_5220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5220 
Symbol 
ID7306646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp5285077 
End bp5286423 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content76% 
IMG OID643602851 
Productsun protein 
Protein accessionYP_002500369 
Protein GI220925067 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.02946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACG GGCACGACGA TCGGACGGCC GGACTGGCGG CGCGGCGCCT CGCCCATGCG 
AGCGTCGCGG ATCTCCTCGG GGCGCGGTCC GGCACCGTCC TCGACGACGT GCTCGACCCG
GCAGCCGCCC GGGCCTCCCT CGGCGCGCAG GATCTCGGGC TCGCCCGGGC GATCGCCGCA
GCCACCTTCC GCCATCTCGG GGTCATCCGC CACGCGCTGG CCGCCCGGAT GACCCAGGGC
CTGCCGGAGG ACCAGCCGCG GCTCCTCGCG CTCCTGGCGA CGGGGGCGGC GCAGATCCTC
TACCTCAACG TTCAGGATCA TGCGGCCGTC GACCTCTCGG TGCGGATCGC CAAGAACGAA
GCGGCCCTGC GCCACCTGAG CGGGCTCGTG AACGCGGTGC TGCGGCGCAT CGCCCGGGAG
CAGGCGGCGA TCCGCCAGGA AGGCGACGCC GACCCGCTGG GGCTCGGCAC GCCCGCCTGG
CTCGCCCGCC GCTGGAGTGC GGCCCATGGC GCGGCGACGG CGCGGGCCAT TGCGGAAGCG
CACATGCGCG GCGCCCCCCT CGACCTCACC GTCAAGGCGG ATCCGGAAAC CTGGGCGGAG
CGCCTCGGGG CCCGGCTCCT GCCGACCGGG AGCCTGCGGC TCGACGACGC CCGCACGCCG
GTGCCGCAAC TCGCCGGCTA CGATTCCGGC GCATGGTGGG TGCAGGACGC CGCCGCCGCC
CTCCCGGCCC GGCTGCTCGC GGTGCGGCCG GGCGAACGCG TCGCCGATCT CTGCGCCGCC
CCCGGCGGCA AGACCGCCCA GCTCGCCGCC GCCGGCGCCG CGGTAGTGGC GGTCGACCGC
TCGGAGGCCC GGCTCCGGCG CCTGAGCGAG AATCTCGCAC GGCTCGGCCT CGCCGCCGAA
ACGCGGGCGG TGGACGCCCT GACGCTCCCG GACGACGACC AATTCGACGC GATCCTGCTC
GACGCGCCCT GCAGCGCCAC CGGTACGATC CGCCGCCACC CCGACGTCGC CTGGACGAAG
CGCGAAGGGG ATCTCCCGCG CCTCGCGGCG CTTCAGGGGA AGCTCCTCGA CAAAGCGGCG
CGGCTCCTGC GGCCGGGCGG GCGGCTCGTC TACTGCACCT GCTCCCTGGA GCCCGAGGAG
GGCGAGGCCC AGGCCGACGC CTTCCTGGCC CGCCATTCGG ATTTCGCGCG CCTGCCGATC
GCCGCCGAGG AGGTCGGCGG GGAGACCGGC TTCGTGAGCG AGCGGGGCGA CCTGCGCACC
CTCCCCTCGC ACTGGCCGGA CGCGGCGGGA GGTCGCGGCG GAATCGACGG GTTCTTCGCG
GTCCGGTTGC GGAAGGCCGA GACCTGA
 
Protein sequence
MDDGHDDRTA GLAARRLAHA SVADLLGARS GTVLDDVLDP AAARASLGAQ DLGLARAIAA 
ATFRHLGVIR HALAARMTQG LPEDQPRLLA LLATGAAQIL YLNVQDHAAV DLSVRIAKNE
AALRHLSGLV NAVLRRIARE QAAIRQEGDA DPLGLGTPAW LARRWSAAHG AATARAIAEA
HMRGAPLDLT VKADPETWAE RLGARLLPTG SLRLDDARTP VPQLAGYDSG AWWVQDAAAA
LPARLLAVRP GERVADLCAA PGGKTAQLAA AGAAVVAVDR SEARLRRLSE NLARLGLAAE
TRAVDALTLP DDDQFDAILL DAPCSATGTI RRHPDVAWTK REGDLPRLAA LQGKLLDKAA
RLLRPGGRLV YCTCSLEPEE GEAQADAFLA RHSDFARLPI AAEEVGGETG FVSERGDLRT
LPSHWPDAAG GRGGIDGFFA VRLRKAET