Gene Mnod_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4816 
Symbol 
ID7307892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4898337 
End bp4899047 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID643602455 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002499981 
Protein GI220924679 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.322083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACA CCCCTTCTCC CCGCGACCGG CTCATCGTCG CCCTCGACAT GGCGACGACC 
GACGAGGCCG AGCGCCTGAT CGATCGCCTC GGCGACGCCG CGTCCTTCTA CAAGATCGGC
TACCGGCTCG GCTATGCGGG TGGCCTCGCC CTCGCCGAGC GGCTGGTGAA GGGCGGCGCG
AAGGTCTTCC TCGATCTCAA GCTCCACGAC ATCGGCAACA CCGTCGAGGA GGGCGTGCAG
TCCCTCGCGC GGCTCGGCGC GCATCTGCTC ACGGTGCACG CCTATCCGCA GACGATGCGG
GCGGCCGTCC GCGGGCGCGA TTCCGTTCCG GGCAGCGCGC TGCGCCTCCT CGCCGTGACG
GTGCTCACCT CCTACGACGA TGCGGATGCC CGCGAGGCGG GCTATGCCCT GAGCGTGTCC
GAACTGGTGG CGATCCGCGC CCTCGCGGCG CGCGAGATCG GCATCGACGG CATCGTCTGC
GCGGCGACCG AAGCGGCGCA GGTGCGCGAG ATCGTCGGAC CGGACGGCCT CATCGTGACG
CCCGGCATCC GGCCGGCCGG CTCCGATACG GGCGACCAGA AGCGCGTCGT GACGCCGGCC
GCCGCCATCC GCGCGGGCGT CGACTACATC GTGGTCGGCC GCCCGATCAC GGCAGCCGCC
GATCCCCGCG CGGTGGCGCA GAGCATCGTC GCCGAGATCG CGGCGGCCTG A
 
Protein sequence
MPDTPSPRDR LIVALDMATT DEAERLIDRL GDAASFYKIG YRLGYAGGLA LAERLVKGGA 
KVFLDLKLHD IGNTVEEGVQ SLARLGAHLL TVHAYPQTMR AAVRGRDSVP GSALRLLAVT
VLTSYDDADA REAGYALSVS ELVAIRALAA REIGIDGIVC AATEAAQVRE IVGPDGLIVT
PGIRPAGSDT GDQKRVVTPA AAIRAGVDYI VVGRPITAAA DPRAVAQSIV AEIAAA