Gene Mnod_4560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_4560 
Symbol 
ID7303656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp4615938 
End bp4617722 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content70% 
IMG OID643602204 
Productcyclic beta-1,2-glucan ABC transporter 
Protein accessionYP_002499730 
Protein GI220924428 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR01192] glucan exporter ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTGT TGCGGCTCTA TGGGCGGGTC ATGCGCCAGC TCGGACCCGA TCTGCGGCTC 
GGCGCCGTGC TCGCGCTCGC CAATGTGGCG CTCGCGGTGG CGGCCTTCGC CGAGCCGGTG
CTGTTCGGAC GGATCATCGA CCGGGTGACG CATCTGCCGG CGCGCGCCGA GGGCACGTCC
TACGGGGACA TCATGCTGCT CGTCGCGGCC TGGGTCGGCT TCGGCCTGTT CACCATCGCG
GCGGGGGTTC TGATCGCGCT CCATGCCGAC CGCCTCTCGC ACCGGCGCCG CCTCGGCGTG
ATGGCGAGCT ATTTCGAGCA TGTCCTCGAC CTGCCGCTCG CCTTCCACTC GGCCCATCAT
TCGGGCCGGG TGCTCAAGGC GATGCTGGAG GGTTCGAGCG GCATGGCGTC GCTGTGGCTC
GGCTTCTTCC GCGACCATTG CGCGGCCCTG GTGTCGCTCA CCGTGCTGCT GCCGATGACC
CTGTTCCTCA ACTGGCAGCT CGGCGCGATC CTGCTCGTCC TGGTGGCGGT CTTCACGGCG
CTCACCACCT TCGTCCTGCG CCGCACGGAG AGCCTGCAGG GCGAGGTGGA GCGCTACCAT
TCGGGCCTCG CCGAGCACGC CTCGGACGCG CTCGGCAACG TCGCGGTGAT CCAGTCCTTC
ACCCGCGCCA GGGCGGAGAA GGAGGCGATG CACGGCATCA TCCGCAACCT CCTCGCCGCC
CAGACCCCGG TCCTGTCCTG GTGGGCGCTC GCCTCGGTGG CGACCCGCGC CTCGGCGACG
CTGACGATGA CGGCGATCTT CGTCACCGGC CTCGCGCTGC ACTTCCGGGG CCAGGCGAGC
GTCGGCGAGG TCGTCTCCTT CATGAGCCTC GCGACGCTCC TCGTCGGGCG CCTCGATCAG
GTCGTGTCCT TCGTCAACGG GCTGTTCATG CAGGCGCCCA AGATGCAGGA ATTCTTCGAC
ATCCTCGACA CGGTCCCGGC CGTGCACGAT CGTCCGAATG CCCGCGCGGT CACCCGGATC
GCCGGCGAGG TGGCCTTCGA GGACGTGACC TTCTCGTATG ACGGCAAGCG CCGCGCTCTC
GACGGGATCA GCTTCTCGGT CCGGCCGGGC GAGACCGTGG CGCTCGTCGG CACCACGGGG
TCGGGCAAGT CCACGACGCT CAGCCTGCTC CACCGCGCCT TCGACCCGGA GACCGGGACG
ATCCGCATCG ACGGCGAGGA CATCCGCGAC CTCTCCGTCG CGTCGCTCCG GCACAATATC
GGCGTGGTGT TCCAGGAGCC GATGCTGTTC GCCCGCTCGA TCCGCGAGAA CCTGCAGGTC
GGTCGGCCCG ACGCCACCGA TGCCGAGATG CTGGACGCCC TGGAGCGCGC GCAGGCGATG
GACTTCCTGG CCCGCCAGCC GGACGGGCTC GATGCGGTGA TCGGCGAGCG CGGACGTTCG
CTGTCGGGCG GCGAGCGCCA GCGGCTCTCG ATCGCGCGGG CCCTGCTGAA GAACCCGCCG
GTCCTGATCC TGGACGAGGC GACGAGTGCG CTCGACGCGG CCACCGAGCG CAAGCTGCAG
GGCGCGCTCG AAGCCGTGAT GGAGGGCCGC ACGACCTTCG TGATCGCCCA CCGCCTCGCC
ACGATCCGCA ATGCCGACCG CATCCTCGTC TTCGACAAGG GGCGCATCAT CGAGGCGGGC
CGCTTCGACG ACCTCGTCGC CCAGGGCGGG CGGTTCGCGG AACTCGCGCG GGCGCAGTTC
ATGGCGGCCG GGACGCCGGC GGATTCCTGC GCGCTCGCGG CCTGA
 
Protein sequence
MRLLRLYGRV MRQLGPDLRL GAVLALANVA LAVAAFAEPV LFGRIIDRVT HLPARAEGTS 
YGDIMLLVAA WVGFGLFTIA AGVLIALHAD RLSHRRRLGV MASYFEHVLD LPLAFHSAHH
SGRVLKAMLE GSSGMASLWL GFFRDHCAAL VSLTVLLPMT LFLNWQLGAI LLVLVAVFTA
LTTFVLRRTE SLQGEVERYH SGLAEHASDA LGNVAVIQSF TRARAEKEAM HGIIRNLLAA
QTPVLSWWAL ASVATRASAT LTMTAIFVTG LALHFRGQAS VGEVVSFMSL ATLLVGRLDQ
VVSFVNGLFM QAPKMQEFFD ILDTVPAVHD RPNARAVTRI AGEVAFEDVT FSYDGKRRAL
DGISFSVRPG ETVALVGTTG SGKSTTLSLL HRAFDPETGT IRIDGEDIRD LSVASLRHNI
GVVFQEPMLF ARSIRENLQV GRPDATDAEM LDALERAQAM DFLARQPDGL DAVIGERGRS
LSGGERQRLS IARALLKNPP VLILDEATSA LDAATERKLQ GALEAVMEGR TTFVIAHRLA
TIRNADRILV FDKGRIIEAG RFDDLVAQGG RFAELARAQF MAAGTPADSC ALAA