| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4392 |
|---|
| Symbol | |
|---|
| ID | 7303034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 4441891 |
|---|
| End bp | 4443519 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643602040 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002499566 |
|---|
| Protein GI | 220924264 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGCC TGATGCAGGA CTGGCCTCTG CTGATCCACC GTGTCATCGA CTATGCGGCC
TCCCAGCACC GGGACCGGGC GGTGATCTCC CGCTCGGTCG AGGGACCGAT GCATCGGACG
ACCTACGGGG CGGTGCGCCT GCGGGCGCTG CGCCTCGCCA AGCGGCTGGA GCGGGACGGC
ATCCGGCTCG GCGACCGCGT CGCGACGCTC GCCTGGAACA CCTGGCGCCA CCTGGAAGCG
TGGTACGGCA TCACCGGAAT CGGGGCCGTC TACCACACCG TGAACCCCCG TCTGTTCACC
GAGCAGATCG CCTACATCAT CAATCACGCG GAGGACCGGA TCCTCCTCCT CGACCTGACC
TTCGTGCCGC TGGTGGAGCG CCTCGCCGAT CAGCTGCCGA CGATCGAGCG CTACGTCGTG
CTCACGGACG GCGCCCACAT GCCGCAGACG AGCCTGCGCA ACGCCGTCGC GTACGAGGAT
TGGATCGCCG AAGCGGATGC GGATTTCGCC TGGGCCTCCT TCGACGAGAA CACGGCGGCC
GGCCTCTGCT ACACCTCCGG CACCACCGGC AACCCGAAGG GCGTGCTCTA CTCCCACCGC
TCGAACCTGC TGCACGCGCT GGCGAATAAC GGCCCCGACT ATATCGGGCT CGCCAGCCGC
GACATCGCGA TGCCGGTGGT GCCGCTCTTC CACGCCAACA GCTGGTCGCT CGCCTTCGCG
GGACCGATGG CGGGCGCCTC GCTGGTCCTG CCGGGGCCGA AGCTCGACGG CGCCTCGATC
CACGACCTGC TGGAATCGAC CGGCGTCACC GTCACGGCGG CGGTTCCGAC GGTGTGGCTC
GGCCTGCTCC AGCACCTCGA CGCGACGGGC GGCCGCCTCT CCCGCCTGCG GCGCGTGGTC
ATCGGCGGCT CCGCCTGCCC GCGGGCGATG ACCGAACGCT TCGAGCGCGA ATTCGGCGTC
AGCGTCGTGC ATGCCTGGGG CATGACCGAG ATGAGCCCGA TCGGCTCCTT CTGCTCGCTC
AAGCCCGAGG TCGAGAATCT CGAGGGCGAG GCGCGCCTCG ACCTGAAGAT GAGGCAGGGC
TATCCGCCCT TCGGGGTCGA GTTCCGGCTG ACCGGCGACG ACGGCCGCGA CCTGCCCTGG
GACGGCACCA CGTTCGGGCG GCTCAAGGTT GCGGGCCCGG CGGTGGCCAG GGCCTATTTT
CGCGACGACA CGCCCATCCT CGACGATCGC GGCTTCTTCG ATACCGGCGA CATCGCGACG
ATCGATCCGA ACGGCTACAT GATGGTCACG GACCGCTCGA AGGACGTGAT CAAGTCGGGG
GGCGAGTGGA TCTCCTCGAT CGAGCTGGAA AACCTCGCCA TCGGCCATCC GGACGTGGCC
GAGGCGGCGG TGATCGGCAT CGCGCACCCG AAATGGGACG AGCGGCCCCT CCTCGTGGTG
GTGCCGAAGG CTGGCCGCAC GCCGGACAAG GCCGACATCC TCGACTTCAT GCGCCCGCGC
ATTGCAAAAT GGTGGCTGCC CGACGACGTG GTGCTGGTGG AGGAGATCCC CCATACGGCG
ACGGGCAAGA TCCAGAAGAC GGCGCTGCGG GAGCGATTCC GCGATTATCG GCTGCCCAGA
GTGGCATGA
|
|---|
| Protein sequence | MLGLMQDWPL LIHRVIDYAA SQHRDRAVIS RSVEGPMHRT TYGAVRLRAL RLAKRLERDG
IRLGDRVATL AWNTWRHLEA WYGITGIGAV YHTVNPRLFT EQIAYIINHA EDRILLLDLT
FVPLVERLAD QLPTIERYVV LTDGAHMPQT SLRNAVAYED WIAEADADFA WASFDENTAA
GLCYTSGTTG NPKGVLYSHR SNLLHALANN GPDYIGLASR DIAMPVVPLF HANSWSLAFA
GPMAGASLVL PGPKLDGASI HDLLESTGVT VTAAVPTVWL GLLQHLDATG GRLSRLRRVV
IGGSACPRAM TERFEREFGV SVVHAWGMTE MSPIGSFCSL KPEVENLEGE ARLDLKMRQG
YPPFGVEFRL TGDDGRDLPW DGTTFGRLKV AGPAVARAYF RDDTPILDDR GFFDTGDIAT
IDPNGYMMVT DRSKDVIKSG GEWISSIELE NLAIGHPDVA EAAVIGIAHP KWDERPLLVV
VPKAGRTPDK ADILDFMRPR IAKWWLPDDV VLVEEIPHTA TGKIQKTALR ERFRDYRLPR
VA
|
|---|
| |