| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_4385 |
|---|
| Symbol | |
|---|
| ID | 7303027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 4433668 |
|---|
| End bp | 4434684 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643602033 |
|---|
| Product | TRAP dicarboxylate transporter, DctP subunit |
|---|
| Protein accession | YP_002499559 |
|---|
| Protein GI | 220924257 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.305111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAC CGACCCTCAG CCGCCGCACG CTCCTTGCCG GCGCGGCCAG CCTGCCCCTC
GTCACCATCC TGCGCCGCCC CGCCAACGCG GCCGAGTTCG AGTACAAGCT CGCCACCGGA
CAGGACCCGA CCCACCCGGT CAATCTCCGC GCCCAGGAAG CCCTCAACCG CATCCGCGAG
GCGTCGGGCG GCCGGCTCGA CATCAAGCTC TTCCCGGCCA ACCAGCTCGG CTCCGACACC
GACCTGCTCT CGCAGGTGCG CAACGGCAGC GTCGAGTTCT TCAACCTCTC GACCTCGATC
CTCGCGACCT TCATTCCCGC CGCGAGCCTC CCCAATACCG GCTTCGCCTT CAAGGACTAC
GACGCCGTCT GGGCGGCGAT GGACGGCGGG CTCGGCAACT ATATCCGCGA GCAGATCGCC
AAGACGCCCA TCCAGACCGT CTCGAAGGCC TGGGACAACG GTTTCCGCCA CATCACCTCG
TCGACCCGCG AGATCCGCAC GCCCGAGGAC CTCAAGGGCT TCAAGATCCG GGTGCCTCCG
GCCCCGATGC TGACCTCCCT GTTCAAGGCT CTCGAGGCCG GGGCGGCGCC GCTCAACTTC
AACGAGCTCT ACTCCGCGCT GCAGACCAAG ATCTTCGAGG GCCAGGAGAA TCCGCTCGCC
ATCACGGCCA CGACGCGGCT CTACGAGGTG CAGAAGTCCT GCAGCCTCAC CGGCCATGTC
TGGGACGGCT ACTGGATCCT CGGCAACAAG CGCGCCTTCC AGCGCCTGCC GGAGGATCTG
CGCGCGCTCG TCACCCGCGA GCTCGACCGC TCGGCCGACG ACCAGCGGGC CGATATCGTC
CGCCTGAGCG CCTCCCTGCG CCAGGAGCTG ACCGCCAAGG GGATCACCTT CATCGAGGTC
AATCGCGATC CTTTCCGCGA TGCGCTCGGC CGCACGACCT TTTACAAGGA CTGGCGCGCC
AAGTTCGGTG ACGCGGCCTG GGGCCACCTG GAAGCCGTGT CCGGTAAGCT GGCCTGA
|
|---|
| Protein sequence | MSTPTLSRRT LLAGAASLPL VTILRRPANA AEFEYKLATG QDPTHPVNLR AQEALNRIRE
ASGGRLDIKL FPANQLGSDT DLLSQVRNGS VEFFNLSTSI LATFIPAASL PNTGFAFKDY
DAVWAAMDGG LGNYIREQIA KTPIQTVSKA WDNGFRHITS STREIRTPED LKGFKIRVPP
APMLTSLFKA LEAGAAPLNF NELYSALQTK IFEGQENPLA ITATTRLYEV QKSCSLTGHV
WDGYWILGNK RAFQRLPEDL RALVTRELDR SADDQRADIV RLSASLRQEL TAKGITFIEV
NRDPFRDALG RTTFYKDWRA KFGDAAWGHL EAVSGKLA
|
|---|
| |