| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3437 |
|---|
| Symbol | |
|---|
| ID | 7308802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3558280 |
|---|
| End bp | 3559068 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643601110 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002498654 |
|---|
| Protein GI | 220923352 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAA GACTTGCCGG CAAGGTGGCC CTCGTCACGG GCAGCGCGCG CGGCATCGGG
CTCGCGATAG CCCGGGCCTT CGCGCGCGAG GGGGCGTCGG TGGTGATCGC CGACGTGAAC
GAAGCAAGCG CCGAGGAGGC CGCGTCCGGC CTCCTCCGGG AGGGCGGGCG CGCCATGGCG
GTCGCGGTCG ACGTCGCCGA CCCCACCTCC ATCGCCGGCA TGATGGAGGC GATCCTCCGC
CGCCACGGGC GCCTCGACAT CCTCGTCAAC AATGCCGGGG TCGGGGGCAA CACGCCCTTC
CTGGAGACGA GCCTCGCCGA CTGGAACCGC ATCATCGGCA TCAATCTCAC GGGCGCCTTC
CTGGTCGCGC AGGCCTGCGC GCGGGAGATG GTGCGGGTCG GCGGCGGCAA GATCGTCAAC
ATCGCCTCGC TCTCCGGACA GCGGGGCGGC AACGGGCGGG CCGCCTACGG AGCGGCCAAG
GCGGGGCTCG AACTCCTCAC CAAGGTGATG GCCGTCGAAC TCGCCGAGCA CAACATCAAC
GTCAACAACA TCGCCCCGGG CGCGATCGAA ACCGAGATGG CGAAGTTCGC GCACGACGAG
GCCACGCGCG CCGCCTACAA CTACCTGATC CCCATGACCC GCTACGGCAC GCCCGAGGAG
ATCGCGGACG CGGCGGTGTT CCTCTGCTCC GACGAGAGCC GCTACGTCCA CGGCCACACG
CTCAACGTCG ACGGCGGCTT CCGGGCTGCG GGCCTGATGT TCAAGCGCGC CGCGCCCCCA
GCCGCCTGA
|
|---|
| Protein sequence | MNQRLAGKVA LVTGSARGIG LAIARAFARE GASVVIADVN EASAEEAASG LLREGGRAMA
VAVDVADPTS IAGMMEAILR RHGRLDILVN NAGVGGNTPF LETSLADWNR IIGINLTGAF
LVAQACAREM VRVGGGKIVN IASLSGQRGG NGRAAYGAAK AGLELLTKVM AVELAEHNIN
VNNIAPGAIE TEMAKFAHDE ATRAAYNYLI PMTRYGTPEE IADAAVFLCS DESRYVHGHT
LNVDGGFRAA GLMFKRAAPP AA
|
|---|
| |