Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3043 |
Symbol | |
ID | 7303970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 3136157 |
End bp | 3137992 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643600742 |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_002498287 |
Protein GI | 220922985 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.313865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGACG AGCCGAAACA GACCCAGCGC ATCGCCCGGC TGACCACGCC GCTCGGGGCG GACCGGCTCG TGCTCGCCCG CTTCGAGGCC GAGGAGGGCC TGAGCACCCT GTTCGAGTTC CGCGTCGACG CGCTGAGCAC GCAGGCGAAC CTCGACTTCA CCCGCGCGCT CGGCCGCACC TGCACGGTGT CGGTCGCGAG CTACGGAGGC GCGACGCGCC ACTTCAACGG CGTGCTCACC GAGGCGCGCT GGGCCGGGAT CGAGCAGTCG GCCTACCACG CCTACCGGCT CACCCTGCGT CCCTGGCTCT GGCTCCTCGG GCGCAAGGCC GATTGCCGGA TCTTCAAGGA CAAGACGCCC CTCGACATCA TCGAGGACGT GTTCCAGCGC GGCGGCTTCC CGGATTTCGA GGTGCGGGCG AGCCGGGGCG ACTACCCGAA GCTCGACTAC TGCGTGCAGT ACCGCGAGAG CGACCTCGCC TTCGTGTCGC GGCTGATGGA GCTCTACGGG ATCTACACCT TCCACGAGCA CGGCGAGGAC CGCCACGTCC TCGTCCTCGC CGATGCCCGC TCCTGCCACA AGCCGGTCGC CGCCGCGGGC GGGCGGATCC CCTTCGTGGC GCTTGCCGGC AGCGACCAGC CCGAGGCGGA GCACATCCAC TCCTGGGAGG CCGAGCGGCG CTTCCGCACC GGCCGGATGG CGCTCAACGA CTTCGACCCG ATGAAGCCCG CCGCCGACCT GAAGGCGGAC GCGCAAGCCT CCGAGGGCTA CGCGCGCGCC TTGCTCGAAG CCTACGACTA TCCCGGCCGC TACACCGAGC AGGAGCGCGG CCGGCGCCTC GCGCGGGTGC GGCTCCAGGC CGAGCAGGCG CTCGATCACC GCAAGCACGT CGCGGGCGAC GCCGTGAGCC TCGCGCCGGG CGGCCTCGCC ACGGTGCAGG GCCACCCGAC CGACGACGGC GAGTACCTCG TGGTGAGCGC CCGCCACGTC TTCGCGGGCG AGGCCTACCG CACCGGGGCC GAACCGGTCG CGGCCGGCGC CGCCTATCGC GGGCAGTACG AATTCCTGCG CAGCGACATC CCGTTCCGGG CGCCCCCCGT CACCCCGCGC GCCCTCGTGC ACGGCCCGCA GACCGCGACC GTCGTCGCCC GCAAGGGCAA GGAGGGCGAG GAGATCGACG TGGACGAGGA GGGGCGCGTC TTCGTGCAGT TCCACTGGAA CCGCGAGCGC GACGTGATCT CCCGGCCCGT CCGGGTCGCC CAGATGTGGG CGGGCAAGTC CTGGGGCTGG CAGGTCATCC CACGCGTCGG CCAGGAGGTG GTGGTCGAGT TCCTCGAAGG CGATCCCGAC CGGCCGCTCG TCGTCGGCGC CGTCTACAAC AAGAACAACC GATTCCCCTA CGCGCTGCTC GACGACAAGA CCGTCTCGGG CGTCAAGTCG GACGCGAGCA AGGGTCACAA CGGCCACAAC GAGTTCGCAC TCGACGACCG CAAGGGCGGC GAGCTGGTGC GGCTGCGGGC CGAGCGCGAC CACGAGACCT TGGTGCGGCG GGCCGAGACG CGCACCATCG GCGAGGCCTT CGCGCCGGCC GCGGGCGCGC CCTCGCGCAC CACGACGCTC CGGAACGGGG ACGACCGGCT CAGCATCGAG AACGGCAACT GGAGCGTCGA GGCCGCCGGC ACGGTCTCGA TCAAGGCCGG CACGCGGCTC GTGCTTCAGG TCGGGGCGAG CCGCATCGTC ATGGAGCCCG CCAGGATCCG CATCGAATCC GGCGACATCG CGATCGACGG GGCGGCGCAT CTCGCCCTCA CGAGCGCGCA GCTGAGCATC GGGTGA
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Protein sequence | MPDEPKQTQR IARLTTPLGA DRLVLARFEA EEGLSTLFEF RVDALSTQAN LDFTRALGRT CTVSVASYGG ATRHFNGVLT EARWAGIEQS AYHAYRLTLR PWLWLLGRKA DCRIFKDKTP LDIIEDVFQR GGFPDFEVRA SRGDYPKLDY CVQYRESDLA FVSRLMELYG IYTFHEHGED RHVLVLADAR SCHKPVAAAG GRIPFVALAG SDQPEAEHIH SWEAERRFRT GRMALNDFDP MKPAADLKAD AQASEGYARA LLEAYDYPGR YTEQERGRRL ARVRLQAEQA LDHRKHVAGD AVSLAPGGLA TVQGHPTDDG EYLVVSARHV FAGEAYRTGA EPVAAGAAYR GQYEFLRSDI PFRAPPVTPR ALVHGPQTAT VVARKGKEGE EIDVDEEGRV FVQFHWNRER DVISRPVRVA QMWAGKSWGW QVIPRVGQEV VVEFLEGDPD RPLVVGAVYN KNNRFPYALL DDKTVSGVKS DASKGHNGHN EFALDDRKGG ELVRLRAERD HETLVRRAET RTIGEAFAPA AGAPSRTTTL RNGDDRLSIE NGNWSVEAAG TVSIKAGTRL VLQVGASRIV MEPARIRIES GDIAIDGAAH LALTSAQLSI G
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