Gene Mnod_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2717 
Symbol 
ID7307016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2789510 
End bp2790235 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID643600430 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002497976 
Protein GI220922674 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTCG AACCCAACCT TCTCCGGGGC AAGACGGCGA TCGTCACCGG CGGGACCACG 
GGCATCGGCG CCGGCATCGT GGAGGCGCTG AGCGGCCTGG GCGCCCGGGT GGTCGCGGTG
GGGATCGGGG CCGCGGCCTA CCGCGCGCCC GCCGGGGCCG ACGTGGTCGC CCGCGAGCTG
GACGTGACGG ACGATGCCGG CGTCGCGGCG CTGGTGGATT CCTGCGAGCG GATCGACATC
GTGGTGAATT GCGCCGGCAT CATCCGGCGT GTCGAAGAGC ATCAGCTCGA CGTGTTCGAG
CGGGTGCTGG CGGTCAATCT GACCGGGACG ATGCGCGTCT GCACCGCGGC GCGAAGCAAG
CTCGCGGCGA GCAGCGGATG CATCGTCAAC ACGGCGTCGA TGCTGTCCTT CTTCGGCGGG
AGCTTGGTTC CGGCCTACAG CGCCAGCAAG GGCGGCGTGG CCCAGCTGAC GAAATCGCTC
GCGCTCGCCT ACGCGCCCGA CGGCATTCGG GTCAATGCCG TCGCGCCGGG CTGGATCGCG
ACGCCGCTGA CGCAGGCCCT GCAGGACGAC CCGGCGCGGT CGCAGCCGAT CCTGTCCCGC
ACCCCGCTCG GCCGCTGGGG CACGCCGCAC GACGTGGCGC AGGCGGTGAG TTTCCTCGTC
AGCCCGGCCG CGAGCTTCAT GACCGGAGTG ATCCTGCCGG TTGATGGCGG ATACCTCATT
GCCTAG
 
Protein sequence
MTFEPNLLRG KTAIVTGGTT GIGAGIVEAL SGLGARVVAV GIGAAAYRAP AGADVVAREL 
DVTDDAGVAA LVDSCERIDI VVNCAGIIRR VEEHQLDVFE RVLAVNLTGT MRVCTAARSK
LAASSGCIVN TASMLSFFGG SLVPAYSASK GGVAQLTKSL ALAYAPDGIR VNAVAPGWIA
TPLTQALQDD PARSQPILSR TPLGRWGTPH DVAQAVSFLV SPAASFMTGV ILPVDGGYLI
A